RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FAAP20Q6NZ36 180 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 Q6P435 159 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 ACP7Q6ZNF0 438 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 MOGAT3Q86VF5 341 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 GLCCI1Q86VQ1 547 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 OR4S1Q8NGB4 309 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 OR4D10Q8NGI6 311 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 FAM222BQ8WU58 562 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 LRRC29Q8WV35 223 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 SNAPC3Q92966 411 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 PLEKHA6Q9Y2H5 1048 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 TANC2Q9HCD6 1990 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 SRRM5B3KS81 715 aa17.53■□□□□ 0.4
PNKP-203ENST00000593946 ZNF736B4DX44 427 aaPredicted RBP17.53■□□□□ 0.4
PNKP-203ENST00000593946 FIP1L1Q6UN15 594 aaKnown RBP17.53■□□□□ 0.4
PNKP-203ENST00000593946 ERGIC1Q969X5 290 aa17.53■□□□□ 0.4
PNKP-203ENST00000593946 HDHD3Q9BSH5 251 aaPredicted RBP17.53■□□□□ 0.4
PNKP-203ENST00000593946 MMP28Q9H239 520 aa17.53■□□□□ 0.4
PNKP-203ENST00000593946 GCM1Q9NP62 436 aa17.53■□□□□ 0.4
PNKP-203ENST00000593946 LRBAP50851 2863 aa17.53■□□□□ 0.4
PNKP-203ENST00000593946 hCG_2014768A0A024R1R8 64 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 TRAV24A0A0B4J272 114 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 UBE2QL1A1L167 161 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 GLRA1P23415 457 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 GIFP27352 417 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 HLA-DMAP28067 261 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 HOXA4Q00056 320 aaPredicted RBP17.52■□□□□ 0.4
PNKP-203ENST00000593946 FAM209AQ5JX71 171 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 OR52W1Q6IF63 320 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 PLET1Q6UQ28 207 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 DYRK2Q92630 601 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 CMSS1Q9BQ75 279 aaKnown RBP17.52■□□□□ 0.4
PNKP-203ENST00000593946 CACNG6Q9BXT2 260 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 DPAGT1Q9H3H5 408 aa17.52■□□□□ 0.4
PNKP-203ENST00000593946 GLAP06280 429 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 CCR6P51684 374 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 SWI5Q1ZZU3 235 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 SMIM21Q3B7S5 101 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 HOGA1Q86XE5 327 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 ZCCHC24Q8N2G6 241 aaKnown RBP17.52■□□□□ 0.39
PNKP-203ENST00000593946 MUC15Q8N387 334 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 GCSAMQ8N6F7 178 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 SUMF2Q8NBJ7 301 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 Q8TCH9 128 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 MCUBQ9NWR8 336 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 RASL12Q9NYN1 266 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 COPZ2Q9P299 210 aa17.52■□□□□ 0.39
PNKP-203ENST00000593946 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.51■□□□□ 0.39
PNKP-203ENST00000593946 DEGS1O15121 323 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 RAB3DO95716 219 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 OR2H2O95918 312 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 LHBP01229 141 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 TBPP20226 339 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 DTYMKP23919 212 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 RBMXP38159 391 aaKnown RBP17.51■□□□□ 0.39
PNKP-203ENST00000593946 CCL8P80075 99 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 MRPS15P82914 257 aaKnown RBP17.51■□□□□ 0.39
PNKP-203ENST00000593946 TESK1Q15569 626 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 UPRTQ96BW1 309 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 MS4A5Q9H3V2 200 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 DYNLRB1Q9NP97 96 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 FAIMQ9NVQ4 179 aa17.51■□□□□ 0.39
PNKP-203ENST00000593946 ZNF230Q9UIE0 474 aaPredicted RBP17.51■□□□□ 0.39
PNKP-203ENST00000593946 SPTAN1Q13813 2472 aaKnown RBP17.5■□□□□ 0.39
PNKP-203ENST00000593946 DSCAMO60469 2012 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 MCRIP1C9JLW8 97 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 M0QYG6 137 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 SH2D1BO14796 132 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 KNG1P01042 644 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 FCGR3AP08637 254 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 ZNF44P15621 663 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 EGR1P18146 543 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 TNFRSF1AP19438 455 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 SFRP4Q6FHJ7 346 aaPredicted RBP17.5■□□□□ 0.39
PNKP-203ENST00000593946 BEST4Q8NFU0 473 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 ST6GALNAC5Q9BVH7 336 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 TINAGL1Q9GZM7 467 aaPredicted RBP17.5■□□□□ 0.39
PNKP-203ENST00000593946 CHST6Q9GZX3 395 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 C12orf4Q9NQ89 552 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 ZNF701Q9NV72 531 aaPredicted RBP17.5■□□□□ 0.39
PNKP-203ENST00000593946 COL12A1Q99715 3063 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 SLC33A1O00400 549 aaPredicted RBP17.5■□□□□ 0.39
PNKP-203ENST00000593946 HAND1O96004 215 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 TCRBP04435 133 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 RNF224P0DH78 156 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 FAM90A1Q86YD7 464 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 OR56B4Q8NH76 319 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 RDH5Q92781 318 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 CREB3L1Q96BA8 519 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 MARVELD1Q9BSK0 173 aa17.5■□□□□ 0.39
PNKP-203ENST00000593946 DPCDQ9BVM2 203 aaPredicted RBP17.5■□□□□ 0.39
PNKP-203ENST00000593946 HSPB6O14558 160 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 HS3ST1O14792 307 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 HRH1P35367 487 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 MEF2DQ14814 521 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 RNASE10Q5GAN6 216 aaKnown RBP17.49■□□□□ 0.39
PNKP-203ENST00000593946 OR4K15Q8NH41 348 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 MAFIPQ8WZ33 124 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 EGLN1Q9GZT9 426 aa17.49■□□□□ 0.39
PNKP-203ENST00000593946 RNF7Q9UBF6 113 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms