RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	LMO1	P25800	156 aa		19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	SRP14	P37108	136 aa	Known RBP	19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	NEDD8	Q15843	81 aa		19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	NHLRC3	Q5JS37	347 aa		19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709		Q6P435	159 aa		19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	C17orf107	Q6ZR85	190 aa		19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	OR4D6	Q8NGJ1	314 aa		19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	TBC1D15	Q8TC07	691 aa		19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	UPRT	Q96BW1	309 aa		19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	FOXRED1	Q96CU9	486 aa	Predicted RBP	19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	C1orf147	Q96MC9	270 aa	Predicted RBP	19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	PCDHB16	Q9NRJ7	776 aa		19.58	■□□□□ 0.72
ERBB2-209	ENST00000578709	TRIM64C	A6NLI5	447 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	HTR3B	O95264	441 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	OR2H2	O95918	312 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	IL13RA2	Q14627	380 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	C1orf100	Q5SVJ3	147 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	GLT8D1	Q68CQ7	371 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	GLIPR1L1	Q6UWM5	242 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	OR8H2	Q8N162	312 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	CHST4	Q8NCG5	386 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	OR5D13	Q8NGL4	314 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	NANP	Q8TBE9	248 aa		19.57	■□□□□ 0.72
ERBB2-209	ENST00000578709	PSPN	O60542	156 aa		19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	MMP9	P14780	707 aa		19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	CALR	P27797	417 aa	Known RBP	19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	GPR176	Q14439	515 aa		19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	SLC22A6	Q4U2R8	563 aa		19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	AWAT2	Q6E213	333 aa		19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	KIR3DL3	Q8N743	410 aa		19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	SIRPD	Q9H106	197 aa		19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	KPTN	Q9Y664	436 aa		19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	DSCAML1	Q8TD84	2053 aa		19.56	■□□□□ 0.72
ERBB2-209	ENST00000578709	CSTB	P04080	98 aa	Known RBP	19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	GABRR1	P24046	479 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	OR3A1	P47881	315 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	RBM11	P57052	281 aa	Known RBP	19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	RPL31	P62899	125 aa	Known RBP	19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	PIGY	Q3MUY2	71 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	OSR2	Q8N2R0	312 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	POM121	Q96HA1	1249 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	WDFY2	Q96P53	400 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	NR1H4	Q96RI1	486 aa	Predicted RBP	19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	GFI1	Q99684	422 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	C19orf12	Q9NSK7	152 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	GHRL	Q9UBU3	117 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	STUB1	Q9UNE7	303 aa		19.55	■□□□□ 0.72
ERBB2-209	ENST00000578709	TRAV1-2	A0A0B4J238	106 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709		A0A0G2JK05	382 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	SIRPB1	O00241	398 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	DEGS1	O15121	323 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	SERPINA2	P20848	420 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	FGF9	P31371	208 aa	Predicted RBP	19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	ARF6	P62330	175 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	KLF17	Q5JT82	389 aa	Predicted RBP	19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	METTL11B	Q5VVY1	283 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	OR4S1	Q8NGB4	309 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	PPP1R35	Q8TAP8	253 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	IFT22	Q9H7X7	185 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	VCX3A	Q9NNX9	186 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709	ST3GAL6	Q9Y274	331 aa		19.54	■□□□□ 0.72
ERBB2-209	ENST00000578709		A0A1W2PQ09	198 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	SLC33A1	O00400	549 aa	Predicted RBP	19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	MGST3	O14880	152 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	SLC22A1	O15245	554 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	TOX4	O94842	621 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	GTF2F2	P13984	249 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	ZNF44	P15621	663 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	GRK1	Q15835	563 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	C1orf122	Q6ZSJ8	110 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	GDPD3	Q7L5L3	318 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	LINC00596	Q86U02	117 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	CMTM4	Q8IZR5	234 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	MRPS24	Q96EL2	167 aa	Known RBP	19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	TBX15	Q96SF7	602 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	CHST6	Q9GZX3	395 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709	ONECUT1	Q9UBC0	465 aa		19.53	■□□□□ 0.72
ERBB2-209	ENST00000578709		A0A1W2PP11	408 aa		19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709		M0R1W7	72 aa		19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	UBB	P0CG47	229 aa		19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	JUNB	P17275	347 aa	Predicted RBP	19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	SCN1B	Q07699	218 aa		19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	TMEM200B	Q69YZ2	307 aa		19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	C22orf42	Q6IC83	251 aa		19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	FAM185A	Q8N0U4	392 aa		19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	OR4M1	Q8NGD0	313 aa		19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	PCGF1	Q9BSM1	259 aa		19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	AK6	Q9Y3D8	172 aa	Known RBP	19.52	■□□□□ 0.72
ERBB2-209	ENST00000578709	TRAV24	A0A0B4J272	114 aa		19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	SHISA3	A0PJX4	238 aa		19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	CSN2	P05814	226 aa		19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	HTR2C	P28335	458 aa		19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	ERP29	P30040	261 aa	Known RBP	19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	PSMD7	P51665	324 aa		19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	MEF2C	Q06413	473 aa	Predicted RBP	19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	SCGB2A2	Q13296	93 aa		19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	PDCD1	Q15116	288 aa		19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709		Q8N7P7	452 aa		19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	TMEM104	Q8NE00	496 aa		19.51	■□□□□ 0.71
ERBB2-209	ENST00000578709	OR6M1	Q8NGM8	313 aa		19.51	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms