RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SLAMF6Q96DU3 332 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 GPHA2Q96T91 129 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 CALHM2Q9HA72 323 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 VSX1Q9NZR4 365 aaPredicted RBP14.19□□□□□ -0.14
LINC00554-201ENST00000564841 AHCTF1Q8WYP5 2266 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 CFIP05156 583 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 RPL29P47914 159 aaKnown RBP14.19□□□□□ -0.14
LINC00554-201ENST00000564841 CSNK1A1P48729 337 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 TMEM183AQ8IXX5 376 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 CADM4Q8NFZ8 388 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 KCNG3Q8TAE7 436 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 LIN37Q96GY3 246 aaPredicted RBP14.19□□□□□ -0.14
LINC00554-201ENST00000564841 CABLES2Q9BTV7 478 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 OR10A2Q9H208 303 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 PITPNC1Q9UKF7 332 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 GOLT1BQ9Y3E0 138 aa14.19□□□□□ -0.14
LINC00554-201ENST00000564841 CRYM-AS1A6NIL9 109 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 C10orf142B7Z368 130 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 DVL1O14640 695 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 CLPSP04118 112 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 CD33P20138 364 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 MEX3BQ6ZN04 569 aaKnown RBP14.18□□□□□ -0.14
LINC00554-201ENST00000564841 LFNGQ8NES3 379 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 RHBDD1Q8TEB9 315 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 GUCD1Q96NT3 240 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 HIST1H2AAQ96QV6 131 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 GNG13Q9P2W3 67 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 KIAA2026Q5HYC2 2103 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 CEP192Q8TEP8 1941 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 IGHV1OR21-1A0A087WYE8 117 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 XKRY2A2RUG3 117 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 ZFP92A6NM28 416 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 GABRR1P24046 479 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 MPV17LQ2QL34 196 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 BEND2Q8NDZ0 799 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 PPP1R14DQ9NXH3 145 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 SDK2Q58EX2 2172 aa14.18□□□□□ -0.14
LINC00554-201ENST00000564841 TRAV36DV7A0A075B6V5 113 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 IGKV1-9A0A0C4DH69 117 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 IGSF23A1L1A6 192 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 TMEM225BP0DP42 221 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 ZNF17P17021 662 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 TDGF1P3P51864 188 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 PAX5Q02548 391 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 SGCBQ16585 318 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 DNLZQ5SXM8 178 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 OR13D1Q8NGV5 346 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 OR1L3Q8NH93 324 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 SYT3Q9BQG1 590 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 OPN3Q9H1Y3 402 aaPredicted RBP14.17□□□□□ -0.14
LINC00554-201ENST00000564841 GPR84Q9NQS5 396 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 ALDH3B1P43353 468 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 CD81P60033 236 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 FAM180AQ6UWF9 173 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 C20orf196Q8IYI0 205 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 OR1P1Q8NH06 330 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 MAFAQ8NHW3 353 aaPredicted RBP14.17□□□□□ -0.14
LINC00554-201ENST00000564841 DTD1Q8TEA8 209 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 TMEM37Q8WXS4 190 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 PECRQ9BY49 303 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 E9PLN8 166 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 K7ESF4 209 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 TAS2R46P59540 309 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 ERVS71-1P61550 626 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 FOXF1Q12946 379 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 RTN4IP1Q8WWV3 396 aaPredicted RBP14.17□□□□□ -0.14
LINC00554-201ENST00000564841 C11orf40Q8WZ69 217 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 RIMS4Q9H426 269 aaPredicted RBP14.17□□□□□ -0.14
LINC00554-201ENST00000564841 SUSD2Q9UGT4 822 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 CBY1Q9Y3M2 126 aa14.17□□□□□ -0.14
LINC00554-201ENST00000564841 EP300Q09472 2414 aaPredicted RBP14.17□□□□□ -0.14
LINC00554-201ENST00000564841 A0A1B0GUS0 222 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 PLPP3O14495 311 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 CDAP32320 146 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 PMS2P11Q13670 270 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 FAM69BQ5VUD6 431 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 DMRTA1Q5VZB9 504 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 KLHL24Q6TFL4 600 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 DTX1Q86Y01 620 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 FBXL14Q8N1E6 418 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 CLDND2Q8NHS1 167 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 KIAA1456Q9P272 454 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 SEMA5BQ9P283 1151 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 VDAC3Q9Y277 283 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 A0A1B0GW64 132 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 LILRA5A6NI73 299 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 IL12BP29460 328 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 WNT5AP41221 380 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 FGF8P55075 233 aaPredicted RBP14.16□□□□□ -0.14
LINC00554-201ENST00000564841 ELLP55199 621 aaPredicted RBP14.16□□□□□ -0.14
LINC00554-201ENST00000564841 CLDN17P56750 224 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 ZFP36L1Q07352 338 aaKnown RBP14.16□□□□□ -0.14
LINC00554-201ENST00000564841 TMEM187Q14656 261 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 NSDHLQ15738 373 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 ARHGEF39Q8N4T4 335 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 RNF133Q8WVZ7 376 aa14.16□□□□□ -0.14
LINC00554-201ENST00000564841 ACTR3CQ9C0K3 210 aaPredicted RBP14.16□□□□□ -0.14
LINC00554-201ENST00000564841 PATE3B3GLJ2 98 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 DLEU1O43261 78 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 GALR2O43603 387 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 454.4 ms