RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ESRP2Q9H6T0 727 aaKnown RBP11.71□□□□□ -0.53
TPM1-215ENST00000558868 ZNF286AQ9HBT8 521 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 ING3Q9NXR8 418 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 TLN1Q9Y490 2541 aaKnown RBP11.7□□□□□ -0.54
TPM1-215ENST00000558868 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 TMEM82A0PJX8 343 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 UBE2QL1A1L167 161 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 DPRXA6NFQ7 191 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 A6NLC8 198 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 F5H5P2 479 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 F8VVB4 439 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 F8VWA3 439 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 SH2D1BO14796 132 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 DEGS1O15121 323 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 SSNA1O43805 119 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 CREBL2O60519 120 aaPredicted RBP11.7□□□□□ -0.54
TPM1-215ENST00000558868 RHBDL1O75783 438 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 CSN2P05814 226 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 FCGR3AP08637 254 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 ECI1P42126 302 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 SORDQ00796 357 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 CBX3Q13185 183 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 CDK10Q15131 360 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 VHLLQ6RSH7 139 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 SLC22A25Q6T423 547 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 OR6F1Q8NGZ6 308 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 TERB2Q8NHR7 220 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 NEK7Q8TDX7 302 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 MRPL24Q96A35 216 aaKnown RBP11.7□□□□□ -0.54
TPM1-215ENST00000558868 WFIKKN1Q96NZ8 548 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 MSL2Q9HCI7 577 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 CHMP1AQ9HD42 196 aaPredicted RBP11.7□□□□□ -0.54
TPM1-215ENST00000558868 ETAA1Q9NY74 926 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 RASL12Q9NYN1 266 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 TAAR3PQ9P1P4 343 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 ANXA10Q9UJ72 324 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 ERRFI1Q9UJM3 462 aaPredicted RBP11.7□□□□□ -0.54
TPM1-215ENST00000558868 POU2F3Q9UKI9 436 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 ATP23Q9Y6H3 246 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 SPTA1P02549 2419 aa11.7□□□□□ -0.54
TPM1-215ENST00000558868 HEATR1Q9H583 2144 aaKnown RBP11.69□□□□□ -0.54
TPM1-215ENST00000558868 BOLA2-SMG1P6H3BVE0 249 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 H7C1Q1 480 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 ABCD4O14678 606 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 PTBP3O95758 552 aaKnown RBP11.69□□□□□ -0.54
TPM1-215ENST00000558868 ANXA7P20073 488 aaKnown RBP11.69□□□□□ -0.54
TPM1-215ENST00000558868 TNFSF4P23510 183 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 MDH2P40926 338 aaKnown RBP11.69□□□□□ -0.54
TPM1-215ENST00000558868 BSPH1Q075Z2 132 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 Q6ZS49 121 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 C22orf34Q6ZV56 151 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 SLC36A1Q7Z2H8 476 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 BATF2Q8N1L9 274 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 OR2Z1Q8NG97 314 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 OR13C8Q8NGS7 320 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 OR10Z1Q8NGY1 313 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 ZNF488Q96MN9 340 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 DIRC2Q96SL1 478 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 SYT3Q9BQG1 590 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 KCNJ16Q9NPI9 418 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 NECAP2Q9NVZ3 263 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 EHFQ9NZC4 300 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 ZNF230Q9UIE0 474 aaPredicted RBP11.69□□□□□ -0.54
TPM1-215ENST00000558868 ZDHHC8Q9ULC8 765 aa11.69□□□□□ -0.54
TPM1-215ENST00000558868 SHANK1Q9Y566 2161 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 FAM90A27PA6NNH2 459 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 ZNF44P15621 663 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 EIF2B2P49770 351 aaKnown RBP11.68□□□□□ -0.54
TPM1-215ENST00000558868 TAS2R31P59538 309 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 ADORA2A-AS1P86434 159 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 MAB21L1Q13394 359 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 ZNF146Q15072 292 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 PDCD1Q15116 288 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 SURF2Q15527 256 aaPredicted RBP11.68□□□□□ -0.54
TPM1-215ENST00000558868 ZNF626Q68DY1 528 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 FAHD2BQ6P2I3 314 aaPredicted RBP11.68□□□□□ -0.54
TPM1-215ENST00000558868 PCSK4Q6UW60 755 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 OVCH2Q7RTZ1 564 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 LRP11Q86VZ4 500 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 C11orf53Q8IXP5 236 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 SUMF2Q8NBJ7 301 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 CA5BP1Q8WTZ4 195 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 ELMOD3Q96FG2 381 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 FAHD2AQ96GK7 314 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 ST6GAL2Q96JF0 529 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 HDHD3Q9BSH5 251 aaPredicted RBP11.68□□□□□ -0.54
TPM1-215ENST00000558868 DPCDQ9BVM2 203 aaPredicted RBP11.68□□□□□ -0.54
TPM1-215ENST00000558868 BEX2Q9BXY8 128 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 MRPL37Q9BZE1 423 aaKnown RBP11.68□□□□□ -0.54
TPM1-215ENST00000558868 FN3KRPQ9HA64 309 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 BEX1Q9HBH7 125 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 HES4Q9HCC6 221 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 CA10Q9NS85 328 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 TREM2Q9NZC2 230 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 ZNF581Q9P0T4 197 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 RP1L1Q8IWN7 2480 aaPredicted RBP11.68□□□□□ -0.54
TPM1-215ENST00000558868 COL12A1Q99715 3063 aa11.68□□□□□ -0.54
TPM1-215ENST00000558868 TRBV6-6A0A0A6YYG2 114 aa11.67□□□□□ -0.54
TPM1-215ENST00000558868 KIR2DS1A0A191URI9 304 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms