RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 TRAV18A0A075B6X5 111 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 SLC33A1O00400 549 aaPredicted RBP14.21□□□□□ -0.13
CADM1-220ENST00000546000 FCN3O75636 299 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 PAX1P15863 534 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 GNB3P16520 340 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 PRDX2P32119 198 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 S100A5P33763 92 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 GPR6P46095 362 aaPredicted RBP14.21□□□□□ -0.13
CADM1-220ENST00000546000 MICBQ29980 383 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 SPIN3Q5JUX0 258 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 TMEM69Q5SWH9 247 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 FIP1L1Q6UN15 594 aaKnown RBP14.21□□□□□ -0.13
CADM1-220ENST00000546000 CCDC190Q86UF4 302 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 MFSD4AQ8N468 514 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 BPIFB2Q8N4F0 458 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 FAM89BQ8N5H3 189 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 OR10R2Q8NGX6 335 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 RAB40AQ8WXH6 277 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 MRPS24Q96EL2 167 aaKnown RBP14.21□□□□□ -0.13
CADM1-220ENST00000546000 DIRAS2Q96HU8 199 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 SULT4A1Q9BR01 284 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 PECRQ9BY49 303 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 BPESC1Q9GZL8 116 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 PPA2Q9H2U2 334 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 RHOFQ9HBH0 211 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 TMEM165Q9HC07 324 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 PCDHB16Q9NRJ7 776 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 RCC2Q9P258 522 aaKnown RBP14.21□□□□□ -0.13
CADM1-220ENST00000546000 CTSZQ9UBR2 303 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 ADAM30Q9UKF2 790 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 V9GYH0 126 aa14.21□□□□□ -0.13
CADM1-220ENST00000546000 ANKRD17O75179 2603 aaKnown RBP14.21□□□□□ -0.14
CADM1-220ENST00000546000 IGHV4-30-2A0A087WSY4 118 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 TRAV38-1A0A0B4J264 116 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 A0A0G2JMP0 313 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 A0A0X1KG70 313 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 TMEM235A6NFC5 223 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 DEGS1O15121 323 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 PSPNO60542 156 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 PDCD6O75340 191 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 PDLIM4P50479 330 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 GUCA2AQ02747 115 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 MPV17LQ2QL34 196 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 RAB12Q6IQ22 244 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 SNX29P2Q8IUI4 249 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 ASCC1Q8N9N2 400 aaKnown RBP14.2□□□□□ -0.14
CADM1-220ENST00000546000 SUMF2Q8NBJ7 301 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 ZNRF1Q8ND25 227 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 OR4M2Q8NGB6 313 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 OR56B1Q8NGI3 324 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 HDHD3Q9BSH5 251 aaPredicted RBP14.2□□□□□ -0.14
CADM1-220ENST00000546000 BARX1Q9HBU1 254 aaPredicted RBP14.2□□□□□ -0.14
CADM1-220ENST00000546000 AKIP1Q9NQ31 210 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 BEX4Q9NWD9 120 aaPredicted RBP14.2□□□□□ -0.14
CADM1-220ENST00000546000 ING3Q9NXR8 418 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 MRPS7Q9Y2R9 242 aaKnown RBP14.2□□□□□ -0.14
CADM1-220ENST00000546000 KCNK7Q9Y2U2 307 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 MAB21L2Q9Y586 359 aa14.2□□□□□ -0.14
CADM1-220ENST00000546000 UBE2QL1A1L167 161 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 METTL21EPA6NDL7 271 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 CEACAM18A8MTB9 384 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 MFNGO00587 321 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 SH2D1BO14796 132 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 TNFRSF13BO14836 293 aaPredicted RBP14.19□□□□□ -0.14
CADM1-220ENST00000546000 MUC1P15941 1255 aaPredicted RBP14.19□□□□□ -0.14
CADM1-220ENST00000546000 HIST1H1DP16402 221 aaKnown RBP14.19□□□□□ -0.14
CADM1-220ENST00000546000 RANBP1P43487 201 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 OR3A1P47881 315 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 ATXN7L3Q14CW9 347 aaPredicted RBP14.19□□□□□ -0.14
CADM1-220ENST00000546000 PAN3Q58A45 887 aaKnown RBP14.19□□□□□ -0.14
CADM1-220ENST00000546000 OR4S1Q8NGB4 309 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 PLPPR1Q8TBJ4 325 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 C10orf105Q8TEF2 133 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 RAB3CQ96E17 227 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 S100A16Q96FQ6 103 aaKnown RBP14.19□□□□□ -0.14
CADM1-220ENST00000546000 CMTM3Q96MX0 182 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 FAAP24Q9BTP7 215 aa14.19□□□□□ -0.14
CADM1-220ENST00000546000 DPCDQ9BVM2 203 aaPredicted RBP14.19□□□□□ -0.14
CADM1-220ENST00000546000 MEX3AA1L020 520 aaKnown RBP14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A10PA6NDY2 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A18PA6NE21 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A16PA6NEW6 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A20PA6NIJ5 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 NKX6-3A6NJ46 265 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A8PA6NJQ4 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A7PA6NKC0 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A22PA8MWA6 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A12PA8MX19 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A5PA8MXJ8 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A23PA8MXZ1 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 ADAM20O43506 726 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 XRCC3O43542 346 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 ZNF737O75373 536 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A15PP0C7V4 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A13PP0C7W8 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A14PP0C7W9 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 FAM90A24PP0C7X0 464 aa14.18□□□□□ -0.14
CADM1-220ENST00000546000 MDH2P40926 338 aaKnown RBP14.18□□□□□ -0.14
CADM1-220ENST00000546000 SEC61A1P61619 476 aaKnown RBP14.18□□□□□ -0.14
CADM1-220ENST00000546000 LSAMPQ13449 338 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms