RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 PFN3P60673 137 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 ZNF235Q14590 738 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 IRF4Q15306 451 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 TRIP13Q15645 432 aaPredicted RBP4.75□□□□□ -1.65
MRE11-209ENST00000540013 ZNF718Q3SXZ3 478 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 TTLL9Q3SXZ7 439 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 C14orf28Q4W4Y0 310 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 SPIN3Q5JUX0 258 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 CD200R1LQ6Q8B3 271 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 TRPT1Q86TN4 253 aaKnown RBP4.75□□□□□ -1.65
MRE11-209ENST00000540013 SLC25A45Q8N413 288 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 RAB42Q8N4Z0 105 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 SPICQ8N5J4 248 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 ATPAF2Q8N5M1 289 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 ACBD4Q8NC06 268 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 FLVCR1-AS1Q8TAF5 88 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 LMX1AQ8TE12 382 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 CREB3L1Q96BA8 519 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 TLCD1Q96CP7 247 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 CNRIP1Q96F85 164 aaPredicted RBP4.75□□□□□ -1.65
MRE11-209ENST00000540013 PIK3IP1Q96FE7 263 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 UBE2E2Q96LR5 201 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 ZNF599Q96NL3 588 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 RNF167Q9H6Y7 350 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 ZNF442Q9H7R0 627 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 MOB1AQ9H8S9 216 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 PIKFYVEQ9Y2I7 2098 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 BPTFQ12830 3046 aa4.75□□□□□ -1.65
MRE11-209ENST00000540013 SPTA1P02549 2419 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 LOC400499M0QZD8 3231 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 A0A087X0T9 212 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 A0A1W2PQ67 120 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 C16orf97H3BN30 126 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 SRP72O76094 671 aaKnown RBP4.74□□□□□ -1.65
MRE11-209ENST00000540013 BCHEP06276 602 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 FAM228BP0C875 321 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 CT45A10P0DMU9 189 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 THRAP10827 490 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 FOLR1P15328 257 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 FUT3P21217 361 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 AK4P27144 223 aaPredicted RBP4.74□□□□□ -1.65
MRE11-209ENST00000540013 GPR6P46095 362 aaPredicted RBP4.74□□□□□ -1.65
MRE11-209ENST00000540013 OMPP47874 163 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 CYB561P49447 251 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 RORCP51449 518 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 OR12D2P58182 307 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 AP1S1P61966 158 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 PPP1CBP62140 327 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 CLINT1Q14677 625 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 ELOCQ15369 112 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 SLC1A5Q15758 541 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 NRF1Q16656 503 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 DEFB133Q30KQ1 61 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 SPIN4Q56A73 249 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 EPGNQ6UW88 154 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 LRRN1Q6UXK5 716 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 CASP12Q6UXS9 341 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 Q6ZN92 141 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 SH2D5Q6ZV89 423 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 H2AFVQ71UI9 128 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 RIMKLAQ8IXN7 391 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 RDH10Q8IZV5 341 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 OR10Z1Q8NGY1 313 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.74□□□□□ -1.65
MRE11-209ENST00000540013 SLC25A38Q96DW6 304 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 MED8Q96G25 268 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 Q96MT0 163 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 TMEM56Q96MV1 263 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 VAT1Q99536 393 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 LRRC61Q9BV99 259 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 CDCA4Q9BXL8 241 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 SRXN1Q9BYN0 137 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 TCEAL2Q9H3H9 227 aaPredicted RBP4.74□□□□□ -1.65
MRE11-209ENST00000540013 TMEM27Q9HBJ8 222 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 U3KQA8 63 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 MGAQ8IWI9 3026 aa4.74□□□□□ -1.65
MRE11-209ENST00000540013 SPTBP11277 2137 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 LAMA5O15230 3695 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 K7EQG2 157 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 MFSD11O43934 449 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 DPM1O60762 260 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 PROSCO94903 275 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 SERPINA1P01009 418 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 IFNA16P05015 189 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 CD48P09326 243 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 CCDC166P0CW27 439 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 CTSEP14091 401 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 CBR1P16152 277 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 F8A1P23610 371 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 TGFBR2P37173 567 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 DLX6P56179 175 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 OR4D2P58180 307 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 MAXP61244 160 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 RANP62826 216 aaKnown RBP4.73□□□□□ -1.65
MRE11-209ENST00000540013 TMEM30BQ3MIR4 351 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 CCNJQ5T5M9 372 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 MARC1Q5VT66 337 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 SAXO2Q658L1 398 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 NCBP2-AS2Q69YL0 99 aa4.73□□□□□ -1.65
MRE11-209ENST00000540013 GUSBP11Q6P575 273 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms