RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 TMEM200BQ69YZ2 307 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 CDH26Q8IXH8 852 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 CMTM4Q8IZR5 234 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 BCL6BQ8N143 479 aaPredicted RBP18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 SVOPQ8N4V2 548 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 SLC6A7Q99884 636 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 METTL9Q9H1A3 318 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 ING4Q9UNL4 249 aa18.68■□□□□ 0.58
SFSWAP-204ENST00000535399 M0R1W7 72 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 SIRPB1O00241 398 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 UCHL1P09936 223 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 GABRR1P24046 479 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 FPR2P25090 351 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 LMO1P25800 156 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 OR3A1P47881 315 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 TRAM1Q15629 374 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 SSX1Q16384 188 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 GPR157Q5UAW9 335 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 C1orf122Q6ZSJ8 110 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 C9orf139Q6ZV77 190 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 VMO1Q7Z5L0 202 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 LRRTM1Q86UE6 522 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 BPIFB2Q8N4F0 458 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 JAGN1Q8N5M9 183 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 OR4S1Q8NGB4 309 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 OR51T1Q8NGJ9 327 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 OR5D13Q8NGL4 314 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 CHST6Q9GZX3 395 aa18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 SOX21Q9Y651 276 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-204ENST00000535399 CENPVL3A0A0U1RRI6 287 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 MEGF11A6BM72 1044 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 TCF21O43680 179 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 HTR3BO95264 441 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 PSMA1P25786 263 aaKnown RBP18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 GABRA5P31644 462 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 SRSF2Q01130 221 aaKnown RBP18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 GRK1Q15835 563 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 HSD17B12Q53GQ0 312 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 UBE2UQ5VVX9 321 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 ZNF773Q6PK81 442 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 GDPD3Q7L5L3 318 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 NKAIN3Q8N8D7 197 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 PHYHIPQ92561 330 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 LHX4Q969G2 390 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 MUL1Q969V5 352 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 MS4A7Q9GZW8 240 aaPredicted RBP18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 TCF7L1Q9HCS4 588 aa18.66■□□□□ 0.58
SFSWAP-204ENST00000535399 A0A0G2JK05 382 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 RGS9O75916 674 aaPredicted RBP18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 ZNF44P15621 663 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 DLX1P56177 255 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 FABP5Q01469 135 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 ZNF273Q14593 569 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 IL13RA2Q14627 380 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 KCTD21Q4G0X4 260 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 BRD3OSQ6XYD6 125 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 USP43Q70EL4 1123 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 CHST4Q8NCG5 386 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 OR4D6Q8NGJ1 314 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 TBC1D15Q8TC07 691 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 ZNF418Q8TF45 676 aaPredicted RBP18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 TNFRSF14Q92956 283 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 NR1H4Q96RI1 486 aaPredicted RBP18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 SUCNR1Q9BXA5 334 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 UNKLQ9H9P5 680 aaKnown RBP18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 SIRT7Q9NRC8 400 aa18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 MRPS28Q9Y2Q9 187 aaKnown RBP18.65■□□□□ 0.58
SFSWAP-204ENST00000535399 FBN1P35555 2871 aaKnown RBP18.64■□□□□ 0.58
SFSWAP-204ENST00000535399 A0A0A6YYJ9 748 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 SLC33A1O00400 549 aaPredicted RBP18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 MGST3O14880 152 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 DEGS1O15121 323 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 SRMP19623 302 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 EDDM3BP56851 147 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 BPIFB3P59826 476 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 PRB3Q04118 309 aaPredicted RBP18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 SCN1BQ07699 218 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 EDDM3AQ14507 147 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 PIGYQ3MUY2 71 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 NHLRC3Q5JS37 347 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 RUSC1-AS1Q66K80 236 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 METAP1DQ6UB28 335 aaPredicted RBP18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 TCF23Q7RTU1 214 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 C11orf42Q8N5U0 333 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 PPP1R35Q8TAP8 253 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 ZNF48Q96MX3 618 aaPredicted RBP18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 UQCC2Q9BRT2 126 aa18.64■□□□□ 0.57
SFSWAP-204ENST00000535399 IGHV1-69DA0A0B4J2H0 117 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 A0A1W2PP11 408 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 VENTXO95231 258 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 IGHV1-69P01742 117 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 CCL3L1P16619 93 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 PRTN3P24158 256 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 BLMHQ13867 455 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 SLC22A6Q4U2R8 563 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 GLIPR1L1Q6UWM5 242 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 OSR2Q8N2R0 312 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 FCGR1BQ92637 280 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 C1orf147Q96MC9 270 aaPredicted RBP18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 S100A13Q99584 98 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms