RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 FAM90A22PA8MWA6 464 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 SIRPB1O00241 398 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 SH2D1BO14796 132 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 MMP23AO75900 390 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 IGKV1D-12P01611 117 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 MT-ND2P03891 347 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 OCM2P0CE71 109 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 OCMP0CE72 109 aaPredicted RBP13.52□□□□□ -0.25
CPSF1-207ENST00000531727 HTR1DP28221 377 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 EMX1Q04741 257 aaPredicted RBP13.52□□□□□ -0.25
CPSF1-207ENST00000531727 MEDAGQ5VYS4 303 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 NDUFA11Q86Y39 141 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 OR51A4Q8NGJ6 313 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 OR4P4Q8NGL7 312 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 OR13C3Q8NGS6 347 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 OR10AC1Q8NH08 325 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 PYDC1Q8WXC3 89 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 PELI1Q96FA3 418 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 GSTK1Q9Y2Q3 226 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 PLXNB1O43157 2135 aa13.52□□□□□ -0.25
CPSF1-207ENST00000531727 TRGV10A0A0A0MS01 117 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 E9PQ18 207 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 EI24O14681 340 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 PEX14O75381 377 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 KDM4BO94953 1096 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 OR2H2O95918 312 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 BLCAPP62952 87 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 IL18R1Q13478 541 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 ARSJQ5FYB0 599 aaPredicted RBP13.51□□□□□ -0.25
CPSF1-207ENST00000531727 OR52W1Q6IF63 320 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 Q6ZS46 218 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 ACBD7Q8N6N7 88 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 OR13C9Q8NGT0 318 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 CORO2AQ92828 525 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 C4orf36Q96KX1 117 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 COMMD4Q9H0A8 199 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 GAL3ST2Q9H3Q3 398 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 RHOFQ9HBH0 211 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 EXOGQ9Y2C4 368 aaKnown RBP13.51□□□□□ -0.25
CPSF1-207ENST00000531727 PCDHGB5Q9Y5G0 923 aa13.51□□□□□ -0.25
CPSF1-207ENST00000531727 FUOMA2VDF0 154 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 OR4C45A6NMZ5 311 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 ADARB2-AS1A8MUL3 147 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 H3BUI4 141 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 J3QLW9 94 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 ALDOBP05062 364 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 ZNF19P17023 458 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 LMO1P25800 156 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 VDAC2P45880 294 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-207ENST00000531727 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-207ENST00000531727 PRAMEF5Q5TYX0 476 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 HEPN1Q6WQI6 88 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 RNF144BQ7Z419 303 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 RTN4RL2Q86UN3 420 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 SAXO1Q8IYX7 474 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 ABHD12Q8N2K0 398 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 OR5D18Q8NGL1 313 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 SPACA5Q96QH8 159 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 OR5M11Q96RB7 305 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 CITED2Q99967 270 aaPredicted RBP13.5□□□□□ -0.25
CPSF1-207ENST00000531727 MMP28Q9H239 520 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 TAS2R3Q9NYW6 316 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 DPM3Q9P2X0 92 aa13.5□□□□□ -0.25
CPSF1-207ENST00000531727 SNTNA6NMZ2 147 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 XPNPEP2O43895 674 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 CSN2P05814 226 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 CDK2P24941 298 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 GLIPR1P48060 266 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 ALDH3A2P51648 485 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 BDH1Q02338 343 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 AESQ08117 197 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 ALKBH1Q13686 389 aaKnown RBP13.49□□□□□ -0.25
CPSF1-207ENST00000531727 TMEM95Q3KNT9 176 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 BAIAP2L2Q6UXY1 529 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 C16orf82Q7Z2V1 217 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 OR4F17Q8NGA8 305 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 ZNF596Q8TC21 504 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 R3HDM4Q96D70 268 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 LGALS12Q96DT0 336 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 MRPL48Q96GC5 212 aaKnown RBP13.49□□□□□ -0.25
CPSF1-207ENST00000531727 OR4F4Q96R69 305 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 MYCBPQ99417 103 aaPredicted RBP13.49□□□□□ -0.25
CPSF1-207ENST00000531727 OCSTAMPQ9BR26 566 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 ZCCHC4Q9H5U6 513 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 NEK6Q9HC98 313 aa13.49□□□□□ -0.25
CPSF1-207ENST00000531727 IGLV1-47P01700 117 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 ZNF44P15621 663 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 CD34P28906 385 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 SCN1BQ07699 218 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 GALEQ14376 348 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 Q6P435 159 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 REC114Q7Z4M0 266 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 LHFPL3Q86UP9 236 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 CHST4Q8NCG5 386 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 LIN7BQ9HAP6 207 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 DNAH3Q8TD57 4116 aa13.48□□□□□ -0.25
CPSF1-207ENST00000531727 ODAMA1E959 279 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 LEUTXA8MZ59 168 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 H3BNX3 289 aa13.47□□□□□ -0.25
CPSF1-207ENST00000531727 BRS3P32247 399 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms