RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 GPER1Q99527 375 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 SIRPDQ9H106 197 aa9.79□□□□□ -0.84
VPS52-213ENST00000461743 UNKLQ9H9P5 680 aaKnown RBP9.79□□□□□ -0.84
VPS52-213ENST00000461743 RBFOX1Q9NWB1 397 aaKnown RBP9.79□□□□□ -0.84
VPS52-213ENST00000461743 IGKV1-12A0A0C4DH73 117 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 PNMA8CA0A1B0GUJ8 204 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 A0A1W2PQ09 198 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 F8VVB4 439 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 F8VWA3 439 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 GABRPO00591 440 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 NOL3O60936 208 aaKnown RBP9.78□□□□□ -0.84
VPS52-213ENST00000461743 ZNF780AO75290 641 aaPredicted RBP9.78□□□□□ -0.84
VPS52-213ENST00000461743 SC5DO75845 299 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 IGKV1D-12P01611 117 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 TMEM225BP0DP42 221 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 ZNF93P35789 620 aaPredicted RBP9.78□□□□□ -0.84
VPS52-213ENST00000461743 NPBWR2P48146 333 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 COL10A1Q03692 680 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 TPBGQ13641 420 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 IL13RA2Q14627 380 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 NHLRC3Q5JS37 347 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 ASCL4Q6XD76 172 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 LINC00596Q86U02 117 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 FGFRL1Q8N441 504 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 SVOPQ8N4V2 548 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 ASCC1Q8N9N2 400 aaKnown RBP9.78□□□□□ -0.84
VPS52-213ENST00000461743 MINDY2Q8NBR6 621 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 Q8NFD4 153 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 OR52N4Q8NGI2 321 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 OR5D18Q8NGL1 313 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 TNFAIP8L1Q8WVP5 186 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 PHYHIPQ92561 330 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 TBX15Q96SF7 602 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 CCDC90BQ9GZT6 254 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 ZMAT3Q9HA38 289 aaKnown RBP9.78□□□□□ -0.84
VPS52-213ENST00000461743 EXOSC4Q9NPD3 245 aaKnown RBP9.78□□□□□ -0.84
VPS52-213ENST00000461743 PCDHB16Q9NRJ7 776 aa9.78□□□□□ -0.84
VPS52-213ENST00000461743 FBN1P35555 2871 aaKnown RBP9.78□□□□□ -0.84
VPS52-213ENST00000461743 ANK2Q01484 3957 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 hCG_1809904A0A1W2PP81 198 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 A0A1W2PPE2 198 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 A0A1W2PR64 198 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 A0A1W2PRV1 198 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 MEGF11A6BM72 1044 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 SH2D1BO14796 132 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 ANGPTL7O43827 346 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 RBP4P02753 201 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 CSN2P05814 226 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 SFTPBP07988 381 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 CPEP16870 476 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 CEBPDP49716 269 aaPredicted RBP9.77□□□□□ -0.85
VPS52-213ENST00000461743 HILS1P60008 231 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 RPL31P62899 125 aaKnown RBP9.77□□□□□ -0.85
VPS52-213ENST00000461743 GUCA2AQ02747 115 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 MEF2CQ06413 473 aaPredicted RBP9.77□□□□□ -0.85
VPS52-213ENST00000461743 NCR3LG1Q68D85 454 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 GDPD3Q7L5L3 318 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 BATF2Q8N1L9 274 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 CENPSQ8N2Z9 138 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 OR51T1Q8NGJ9 327 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 FCGR1BQ92637 280 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 S100A13Q99584 98 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 UQCC2Q9BRT2 126 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 PCGF1Q9BSM1 259 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 METTL8Q9H825 291 aaKnown RBP9.77□□□□□ -0.85
VPS52-213ENST00000461743 ONECUT1Q9UBC0 465 aa9.77□□□□□ -0.85
VPS52-213ENST00000461743 TRAV8-7A0A075B6U6 113 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 MGST3O14880 152 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 TFF1P04155 84 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 IGHV4-38-2P0DP08 117 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 LMO1P25800 156 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 ERP29P30040 261 aaKnown RBP9.76□□□□□ -0.85
VPS52-213ENST00000461743 GABRA5P31644 462 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 TGFBR2P37173 567 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 PTGFRP43088 359 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 ARF6P62330 175 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 GPR176Q14439 515 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 RSU1Q15404 277 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 LIPKQ5VXJ0 399 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 UNQ9370/PRO34162Q6UXP9 181 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 VMO1Q7Z5L0 202 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 FAM185AQ8N0U4 392 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 MGLLQ99685 303 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 SLC6A7Q99884 636 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 NEURL2Q9BR09 285 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 TMED9Q9BVK6 235 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 MS4A7Q9GZW8 240 aaPredicted RBP9.76□□□□□ -0.85
VPS52-213ENST00000461743 METTL9Q9H1A3 318 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 NOX4Q9NPH5 578 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 ACOT13Q9NPJ3 140 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 IL36RNQ9UBH0 155 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 GSTK1Q9Y2Q3 226 aa9.76□□□□□ -0.85
VPS52-213ENST00000461743 TMEM82A0PJX8 343 aa9.75□□□□□ -0.85
VPS52-213ENST00000461743 H3BMQ9 156 aa9.75□□□□□ -0.85
VPS52-213ENST00000461743 ARL6IP5O75915 188 aa9.75□□□□□ -0.85
VPS52-213ENST00000461743 RGS9O75916 674 aaPredicted RBP9.75□□□□□ -0.85
VPS52-213ENST00000461743 OR2H2O95918 312 aa9.75□□□□□ -0.85
VPS52-213ENST00000461743 UCHL1P09936 223 aa9.75□□□□□ -0.85
VPS52-213ENST00000461743 HSMCR30P0CW71 290 aa9.75□□□□□ -0.85
VPS52-213ENST00000461743 GABRR1P24046 479 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms