RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 FADS2O95864 444 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 IGKV1D-16P01601 117 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 HMGN2P05204 90 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 NPIPA8P0DM63 369 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 PPIAL4GP0DN37 164 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 CNR1P21554 472 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 NFYAP23511 347 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 DTYMKP23919 212 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 IL12BP29460 328 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 OTX1P32242 354 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 S100A3P33764 101 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 GABRA3P34903 492 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 BTCP35070 178 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 RPL3P39023 403 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 DCTP40126 519 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 CD200P41217 278 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 PTGDSP41222 190 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 MAGEA5P43359 124 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 PPICP45877 212 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 FHITP49789 147 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 CCR6P51684 374 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 CEBPGP53567 150 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 HCCSP53701 268 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 PPIAP62937 165 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 PAX5Q02548 391 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 SPHARQ15513 63 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 DUSP5Q16690 384 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 ZSWIM7Q19AV6 140 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 NDUFAF6Q330K2 333 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 AWAT1Q58HT5 328 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 FNDC7Q5VTL7 733 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 SLC22A10Q63ZE4 541 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF660Q6AZW8 331 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 TNFAIP8L2Q6P589 184 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 FAM131AQ6UXB0 335 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 GFRALQ6UXV0 394 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 HMGN2P46Q86SG4 172 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 OAFQ86UD1 273 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 MYPOPQ86VE0 399 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 CBLN2Q8IUK8 224 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 FTMTQ8N4E7 242 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 TMEM251Q8N6I4 163 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 COX18Q8N8Q8 333 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 GATSQ8NAP1 163 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 ZFP62Q8NB50 900 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 AQP11Q8NBQ7 271 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 FAM98AQ8NCA5 519 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 ST6GALNAC3Q8NDV1 305 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 CCDC54Q8NEL0 328 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 OR5AU1Q8NGC0 362 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 CNIH3Q8TBE1 160 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 MARCH1Q8TCQ1 289 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 SPPL2AQ8TCT8 520 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 RNASEH2CQ8TDP1 164 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 PCNPQ8WW12 178 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 ACOT12Q8WYK0 555 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 OR5P2Q8WZ92 322 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 CDS1Q92903 461 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 TAAR8Q969N4 342 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 MBD6Q96DN6 1003 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 KIRREL1Q96J84 757 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 AKR1E2Q96JD6 320 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 OR52E6Q96RD3 313 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 FAM173AQ9BQD7 235 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 SLC35A5Q9BS91 424 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 DOHHQ9BU89 302 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF426Q9BUY5 554 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 POLDIP3Q9BY77 421 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 RAB1BQ9H0U4 201 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 DEFB127Q9H1M4 99 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 C5orf66Q9H5L9 145 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF703Q9H7S9 590 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 IL1RL2Q9HB29 575 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 MSL2Q9HCI7 577 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 NOX4Q9NPH5 578 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 SDR39U1Q9NRG7 319 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 KLRF1Q9NZS2 232 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 MRTO4Q9UKD2 239 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 EXOGQ9Y2C4 368 aaKnown RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 POFUT2Q9Y2G5 429 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 ORC6Q9Y5N6 252 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 SPIN1Q9Y657 262 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-202ENST00000409915 BAHCC1Q9P281 2608 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 EXPH5Q8NEV8 1989 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 USP9XQ93008 2570 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 CENPVL1A0A0U1RR11 272 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 A0A1B0GTH9 108 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 A0A1W2PPE3 182 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 FBLL1A6NHQ2 334 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 NKX6-3A6NJ46 265 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 LRRC30A6NM36 301 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SERPINE3A8MV23 424 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 SEC14L6B5MCN3 397 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 KLRC4-KLRK1H3BQV0 150 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 M0R143 59 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 RNASET2O00584 256 aaKnown RBP3.91□□□□□ -1.78
SF3B1-202ENST00000409915 RS1O15537 224 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 FGF16O43320 207 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 OR2T1O43869 369 aa3.91□□□□□ -1.78
SF3B1-202ENST00000409915 TPST2O60704 377 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms