RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ZNF319Q9P2F9 582 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 LAMP3Q9UQV4 416 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 ARHGAP21Q5T5U3 1957 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 RER1O15258 196 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 ANGPTL7O43827 346 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 MMP16P51512 607 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 TAF9Q16594 264 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.91□□□□□ -0.02
PTPRA-205ENST00000399903 CUTCQ9NTM9 273 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 CHD3Q12873 2000 aaKnown RBP14.91□□□□□ -0.02
PTPRA-205ENST00000399903 A0A1B0GWJ7 208 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 FASLGP48023 281 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 PMS2P11Q13670 270 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 ICAM4Q14773 271 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 THNSL2Q86YJ6 484 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 SLC35G3Q8N808 338 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 OR8B12Q8NGG6 310 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 TUBD1Q9UJT1 453 aa14.91□□□□□ -0.02
PTPRA-205ENST00000399903 F5H5K5 113 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 HSPA12AO43301 675 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 OR4A8P0C604 315 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 MRPS34P82930 218 aaKnown RBP14.9□□□□□ -0.02
PTPRA-205ENST00000399903 PLCXD2Q0VAA5 305 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 ADIRFQ15847 76 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 SPIN3Q5JUX0 258 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 ZNF66Q6ZN08 573 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 C5orf24Q7Z6I8 188 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 SNHG12Q9BXW3 62 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 CHST11Q9NPF2 352 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 ZNF581Q9P0T4 197 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 SFTPDP35247 375 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 KISS1Q15726 138 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 NCR3LG1Q68D85 454 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 FAM185AQ8N0U4 392 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 LGI3Q8N145 548 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 OR1L3Q8NH93 324 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 PTPMT1Q8WUK0 201 aaPredicted RBP14.9□□□□□ -0.02
PTPRA-205ENST00000399903 RNF133Q8WVZ7 376 aa14.9□□□□□ -0.02
PTPRA-205ENST00000399903 CLDN34H7C241 214 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 CD55P08174 381 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 SFTPCP11686 197 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 DUSP1P28562 367 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 SPSB3Q6PJ21 355 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 LRRC18Q8N456 261 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 OR2C3Q8N628 320 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 SHDQ96IW2 340 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 PITPNC1Q9UKF7 332 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 COL4A2P08572 1712 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 C5orf63A6NC05 138 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 CRYM-AS1A6NIL9 109 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 DFFBO76075 338 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 JOSD1Q15040 202 aaPredicted RBP14.89□□□□□ -0.03
PTPRA-205ENST00000399903 P2RY6Q15077 328 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 NSDHLQ15738 373 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 GPR157Q5UAW9 335 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 SLC25A45Q8N413 288 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 MMACHCQ9Y4U1 282 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 IL33O95760 270 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 FAHP16930 419 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 RAB4BP61018 213 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 HNRNPKP61978 463 aaKnown RBP eCLIP14.89□□□□□ -0.031e-6■■■□□ 16
PTPRA-205ENST00000399903 COL10A1Q03692 680 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 FNDC7Q5VTL7 733 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 OR4X1Q8NH49 305 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 C1orf147Q96MC9 270 aaPredicted RBP14.89□□□□□ -0.03
PTPRA-205ENST00000399903 LIME1Q9H400 295 aa14.89□□□□□ -0.03
PTPRA-205ENST00000399903 ZNF705FA8MVS1 300 aaPredicted RBP14.88□□□□□ -0.03
PTPRA-205ENST00000399903 ZNF705DP0CH99 300 aaPredicted RBP14.88□□□□□ -0.03
PTPRA-205ENST00000399903 ZNF705BP0CI00 300 aaPredicted RBP14.88□□□□□ -0.03
PTPRA-205ENST00000399903 MAS1LP35410 378 aa14.88□□□□□ -0.03
PTPRA-205ENST00000399903 HOXB13Q92826 284 aaPredicted RBP14.88□□□□□ -0.03
PTPRA-205ENST00000399903 C10orf142B7Z368 130 aa14.88□□□□□ -0.03
PTPRA-205ENST00000399903 LMO7DNF2Z398 122 aa14.88□□□□□ -0.03
PTPRA-205ENST00000399903 CTSDP07339 412 aaPredicted RBP14.88□□□□□ -0.03
PTPRA-205ENST00000399903 UCP2P55851 309 aa14.88□□□□□ -0.03
PTPRA-205ENST00000399903 OR10S1Q8NGN2 331 aa14.88□□□□□ -0.03
PTPRA-205ENST00000399903 PGAM5Q96HS1 289 aa14.88□□□□□ -0.03
PTPRA-205ENST00000399903 HIST1H2AAQ96QV6 131 aa14.88□□□□□ -0.03
PTPRA-205ENST00000399903 NAA60Q9H7X0 242 aa14.88□□□□□ -0.03
PTPRA-205ENST00000399903 PIAS2O75928 621 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 MT-ATP6P00846 226 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 PNLIPP16233 465 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 SLC6A8P48029 635 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 CSNK1A1P48729 337 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 POLR2HP52434 150 aaKnown RBP14.87□□□□□ -0.03
PTPRA-205ENST00000399903 FUT7Q11130 342 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 CLN3Q13286 438 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 ZNF266Q14584 549 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 LBHQ53QV2 105 aaPredicted RBP14.87□□□□□ -0.03
PTPRA-205ENST00000399903 CCNL2Q96S94 520 aaPredicted RBP14.87□□□□□ -0.03
PTPRA-205ENST00000399903 WWTR1Q9GZV5 400 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 KIAA1456Q9P272 454 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 IGSF23A1L1A6 192 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 NKX2-6A6NCS4 301 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 CEACAM18A8MTB9 384 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 GDF9O60383 454 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 DYNLT3P51808 116 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 HSF1Q00613 529 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 MFAP5Q13361 173 aa14.87□□□□□ -0.03
PTPRA-205ENST00000399903 FER1L5A0AVI2 2057 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms