RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 DACT3Q96B18 629 aaPredicted RBP15.89■□□□□ 0.13
HOXA9-202ENST00000396345 SNX22Q96L94 193 aa15.89■□□□□ 0.13
HOXA9-202ENST00000396345 CHCHD6Q9BRQ6 235 aa15.89■□□□□ 0.13
HOXA9-202ENST00000396345 DCTN5Q9BTE1 182 aa15.89■□□□□ 0.13
HOXA9-202ENST00000396345 TMPRSS13Q9BYE2 586 aa15.89■□□□□ 0.13
HOXA9-202ENST00000396345 MRPS26Q9BYN8 205 aaKnown RBP15.89■□□□□ 0.13
HOXA9-202ENST00000396345 C7orf69Q9H7B7 122 aa15.89■□□□□ 0.13
HOXA9-202ENST00000396345 GHRLQ9UBU3 117 aa15.89■□□□□ 0.13
HOXA9-202ENST00000396345 LOC100506127A0A0U1RQW1 187 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 SHISA3A0PJX4 238 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 TMEM82A0PJX8 343 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 DEGS1O15121 323 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 SLC22A1O15245 554 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 LIPFP07098 398 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 UBBP0CG47 229 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 GTF2F2P13984 249 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 ZNF44P15621 663 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 HNF1AP20823 631 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 HTR2CP28335 458 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 PAX8Q06710 450 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 IL13RA2Q14627 380 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 PDCD1Q15116 288 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 PIGYQ3MUY2 71 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 Q6P435 159 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 OR6M1Q8NGM8 313 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 YIPF6Q96EC8 236 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 C1orf147Q96MC9 270 aaPredicted RBP15.88■□□□□ 0.13
HOXA9-202ENST00000396345 MRI1Q9BV20 369 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 SHARPINQ9H0F6 387 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 PLGRKTQ9HBL7 147 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 ST3GAL6Q9Y274 331 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 V9GY05 133 aa15.88■□□□□ 0.13
HOXA9-202ENST00000396345 FN1P02751 2386 aaKnown RBP15.88■□□□□ 0.13
HOXA9-202ENST00000396345 ANK3Q12955 4377 aaKnown RBP15.88■□□□□ 0.13
HOXA9-202ENST00000396345 A0A1W2PP11 408 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 SLC17A2O00624 439 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 LMO1P25800 156 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 RBM11P57052 281 aaKnown RBP15.87■□□□□ 0.13
HOXA9-202ENST00000396345 TIMM50Q3ZCQ8 353 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 NHLRC3Q5JS37 347 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 C17orf107Q6ZR85 190 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 OR8H2Q8N162 312 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 CHST4Q8NCG5 386 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 LY6G5BQ8NDX9 201 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 OR5D13Q8NGL4 314 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 PPP1R35Q8TAP8 253 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 MRPS24Q96EL2 167 aaKnown RBP15.87■□□□□ 0.13
HOXA9-202ENST00000396345 KCTD7Q96MP8 289 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 BEX2Q9BXY8 128 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 LPAR3Q9UBY5 353 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 CDC42EP3Q9UKI2 254 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 AUP1Q9Y679 476 aa15.87■□□□□ 0.13
HOXA9-202ENST00000396345 NIPBLQ6KC79 2804 aaeCLIP15.87■□□□□ 0.13
HOXA9-202ENST00000396345 TRBV23-1A0A0A0MS06 115 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 A0A0G2JK05 382 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 PSPNO60542 156 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 CRTAPO75718 401 aaPredicted RBP15.86■□□□□ 0.13
HOXA9-202ENST00000396345 AVPP01185 164 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 PPIAL4GP0DN37 164 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 RAB3BP20337 219 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 GRK1Q15835 563 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 RAB11BQ15907 218 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 IL17RELQ6ZVW7 336 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 GDPD3Q7L5L3 318 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 OR4S1Q8NGB4 309 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 C8orf46Q8TAG6 207 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 CHST6Q9GZX3 395 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 BANF2Q9H503 90 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 OPN4Q9UHM6 478 aa15.86■□□□□ 0.13
HOXA9-202ENST00000396345 A0A1W2PQ09 198 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 SLC33A1O00400 549 aaPredicted RBP15.85■□□□□ 0.13
HOXA9-202ENST00000396345 GEMIN2O14893 280 aaKnown RBP15.85■□□□□ 0.13
HOXA9-202ENST00000396345 MGMTP16455 207 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 RANBP1P43487 201 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 OR3A1P47881 315 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 OR10A3P58181 314 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 P2RY14Q15391 338 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 KRTAP21-3Q3LHN1 58 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 GDPGP1Q6ZNW5 385 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 C1orf229Q6ZS94 237 aaPredicted RBP15.85■□□□□ 0.13
HOXA9-202ENST00000396345 LINC00596Q86U02 117 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 TMEM104Q8NE00 496 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 OR4M1Q8NGD0 313 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 OR13F1Q8NGS4 319 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 FAM46BQ96A09 425 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 SLC25A28Q96A46 364 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 POM121Q96HA1 1249 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 DMRTB1Q96MA1 342 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 CENPOQ9BU64 300 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 SELENOIQ9C0D9 397 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 CST11Q9H112 138 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 RNF167Q9H6Y7 350 aa15.85■□□□□ 0.13
HOXA9-202ENST00000396345 MGST3O14880 152 aa15.84■□□□□ 0.13
HOXA9-202ENST00000396345 AIREO43918 545 aa15.84■□□□□ 0.13
HOXA9-202ENST00000396345 CRLF1O75462 422 aa15.84■□□□□ 0.13
HOXA9-202ENST00000396345 OR7C1O76099 320 aaPredicted RBP15.84■□□□□ 0.13
HOXA9-202ENST00000396345 BPNT1O95861 308 aa15.84■□□□□ 0.13
HOXA9-202ENST00000396345 VSIG8P0DPA2 414 aa15.84■□□□□ 0.13
HOXA9-202ENST00000396345 ARF6P62330 175 aa15.84■□□□□ 0.13
HOXA9-202ENST00000396345 RPL31P62899 125 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms