RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 Q6P435 159 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 TMEM91Q6ZNR0 172 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 CDH26Q8IXH8 852 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 CMTM4Q8IZR5 234 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 BCL6BQ8N143 479 aaPredicted RBP17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SVOPQ8N4V2 548 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 KIR3DL3Q8N743 410 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 Q8N7P7 452 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 OR5D13Q8NGL4 314 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SLC6A7Q99884 636 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 METTL9Q9H1A3 318 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 DOCK11Q5JSL3 2073 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 HTR3BO95264 441 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 GABRR1P24046 479 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SCN1BQ07699 218 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 PDCD1Q15116 288 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 TRAM1Q15629 374 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 C1orf122Q6ZSJ8 110 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 VMO1Q7Z5L0 202 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 LYPD6Q86Y78 171 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 OR8H2Q8N162 312 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 BPIFB2Q8N4F0 458 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 JAGN1Q8N5M9 183 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 OR4S1Q8NGB4 309 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 NR1H4Q96RI1 486 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 CHST6Q9GZX3 395 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 TCF7L1Q9HCS4 588 aa17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SOX21Q9Y651 276 aaPredicted RBP17.25■□□□□ 0.35
MAP1LC3A-202ENST00000374837 CENPVL3A0A0U1RRI6 287 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 MEGF11A6BM72 1044 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 M0R1W7 72 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 DEGS1O15121 323 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 RGS9O75916 674 aaPredicted RBP17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 UCHL1P09936 223 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 LMO1P25800 156 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SRSF2Q01130 221 aaKnown RBP17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 GRK1Q15835 563 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SSX1Q16384 188 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 HSD17B12Q53GQ0 312 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 GDPD3Q7L5L3 318 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 LRRTM1Q86UE6 522 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 OR51T1Q8NGJ9 327 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 LHX4Q969G2 390 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 MUL1Q969V5 352 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 S100A13Q99584 98 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 MS4A7Q9GZW8 240 aaPredicted RBP17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 IL36GQ9NZH8 169 aa17.24■□□□□ 0.35
MAP1LC3A-202ENST00000374837 A0A0G2JK05 382 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 RNF212BA8MTL3 300 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 TCF21O43680 179 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 ZNF44P15621 663 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SRMP19623 302 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 PSMA1P25786 263 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 OR3A1P47881 315 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 DLX1P56177 255 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 EDDM3BP56851 147 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 PRB3Q04118 309 aaPredicted RBP17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 TUSC1Q2TAM9 212 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 GPR157Q5UAW9 335 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 UBE2UQ5VVX9 321 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 ZNF773Q6PK81 442 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 BRD3OSQ6XYD6 125 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 PPP1R35Q8TAP8 253 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 TBC1D15Q8TC07 691 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 ZNF418Q8TF45 676 aaPredicted RBP17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 PHYHIPQ92561 330 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SIRT7Q9NRC8 400 aa17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 MRPS28Q9Y2Q9 187 aaKnown RBP17.23■□□□□ 0.35
MAP1LC3A-202ENST00000374837 MGST3O14880 152 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 GABRA5P31644 462 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 FABP5Q01469 135 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 BLMHQ13867 455 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 EDDM3AQ14507 147 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 ZNF273Q14593 569 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 IL13RA2Q14627 380 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 PIGYQ3MUY2 71 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 RUSC1-AS1Q66K80 236 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 GLIPR1L1Q6UWM5 242 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 C9orf139Q6ZV77 190 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 PDZD9Q8IXQ8 264 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 NKAIN3Q8N8D7 197 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 OR4D6Q8NGJ1 314 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 TNFRSF14Q92956 283 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SUCNR1Q9BXA5 334 aa17.22■□□□□ 0.35
MAP1LC3A-202ENST00000374837 IGHV1-69DA0A0B4J2H0 117 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SLC33A1O00400 549 aaPredicted RBP17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 ZNF780AO75290 641 aaPredicted RBP17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 VENTXO95231 258 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 IGHV1-69P01742 117 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 CSTBP04080 98 aaKnown RBP17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 CCL3L1P16619 93 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SERPINA2P20848 420 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 PRTN3P24158 256 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 BPIFB3P59826 476 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 KCTD21Q4G0X4 260 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 SLC22A6Q4U2R8 563 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 USP43Q70EL4 1123 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 OSR2Q8N2R0 312 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 C11orf42Q8N5U0 333 aa17.21■□□□□ 0.35
MAP1LC3A-202ENST00000374837 TPRX1Q8N7U7 411 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms