RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 MAP1LC3BQ9GZQ8 125 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 GLRX2Q9NS18 164 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 SF3B6Q9Y3B4 125 aaKnown RBP15.04■□□□□ -0
TRAPPC11-201ENST00000334690 MYO16Q9Y6X6 1858 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 ZNF320A2RRD8 509 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 CDS2O95674 445 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 POLR2GP62487 172 aaKnown RBP eCLIP15.04■□□□□ -0
TRAPPC11-201ENST00000334690 TFF2Q03403 129 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 ATP6V1FQ16864 119 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 ZNF251Q9BRH9 671 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 SIPA1L1O43166 1804 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 ARID2Q68CP9 1835 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 TSPAN2O60636 221 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 PPYP01298 95 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 IGF2P01344 180 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 ZNF17P17021 662 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 ASXL3Q9C0F0 2248 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 TRDCB7Z8K6 153 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 YIF1AO95070 293 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 IL9P15248 144 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 PNLIPP16233 465 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 RAB7AP51149 207 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 ZNF345Q14585 488 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 SLC22A18ASQ8N1D0 253 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 PSG11Q9UQ72 335 aa15.04■□□□□ -0
TRAPPC11-201ENST00000334690 GEMIN2O14893 280 aaKnown RBP15.03■□□□□ -0
TRAPPC11-201ENST00000334690 ACTL6AO96019 429 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 CCL2P13500 99 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 RPS4Y1P22090 263 aaKnown RBP15.03■□□□□ -0
TRAPPC11-201ENST00000334690 CTHRC1Q96CG8 243 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 UCN2Q96RP3 112 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 SLC2A9Q9NRM0 540 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 SLC35D1Q9NTN3 355 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 C21orf140B9A014 251 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 TMEM267Q0VDI3 215 aaPredicted RBP15.03■□□□□ -0
TRAPPC11-201ENST00000334690 FOXO1Q12778 655 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 PLPPR5Q32ZL2 321 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 SPINK14Q6IE38 97 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 ZDHHC11Q9H8X9 412 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 TMEM38BQ9NVV0 291 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 LPAR3Q9UBY5 353 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 ELF5Q9UKW6 265 aaPredicted RBP15.03■□□□□ -0
TRAPPC11-201ENST00000334690 ZNF250P15622 560 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 TLE1Q04724 770 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 RFLNBQ8N5W9 214 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 OR2H1Q9GZK4 316 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 MMP24Q9Y5R2 645 aa15.03■□□□□ -0
TRAPPC11-201ENST00000334690 FCGR3BO75015 233 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 NQO2P16083 231 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 OR3A1P47881 315 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 PRSS12P56730 875 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 GNB1P62873 340 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 CLEC12BQ2HXU8 276 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 VMA21Q3ZAQ7 101 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 FFAR4Q5NUL3 377 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 HOGA1Q86XE5 327 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 TMEM56Q96MV1 263 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 MYOFQ9NZM1 2061 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 NDUFB3O43676 98 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 COX7A2P2O60397 106 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 CA11O75493 328 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 LYZL6O75951 148 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 LRRC10Q5BKY1 277 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 LINC00052Q96N35 136 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 TOLLIPQ9H0E2 274 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 SCN4AP35499 1836 aa15.02■□□□□ -0
TRAPPC11-201ENST00000334690 SYNGR2O43760 224 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 FCARP24071 287 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 TMEM65Q6PI78 240 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 GPR35Q9HC97 309 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 KCNE5Q9UJ90 142 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 A0A1W2PR80 420 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 CHEK1O14757 476 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 FBP1P09467 338 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 TMEM241Q24JQ0 296 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 Q3ZCU0 254 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 TBC1D26Q86UD7 250 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 PLPPR2Q96GM1 343 aa15.02□□□□□ -0.01
TRAPPC11-201ENST00000334690 C4orf51C9J302 202 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 PNPP00491 289 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 ZNF83P51522 516 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 CNN1P51911 297 aaKnown RBP15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 C19orf57Q0VDD7 668 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 CEBPEQ15744 281 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 TSPO2Q5TGU0 170 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 FAM27BQ5VT28 67 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 SCARF2Q96GP6 870 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 GINS3Q9BRX5 216 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 MRPS18BQ9Y676 258 aaKnown RBP15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 DVL1O14640 695 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 ARL16Q0P5N6 197 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 ETV3LQ6ZN32 361 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 SIGLECL1Q8N7X8 197 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 OR2D2Q9H210 308 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 TRGV8A0A0C4DH27 118 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 J3QT63 122 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 MGAT2Q10469 447 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 LYG1Q8N1E2 194 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 OR5A2Q8NGI9 324 aa15.01□□□□□ -0.01
TRAPPC11-201ENST00000334690 LRRC29Q8WV35 223 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms