RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, human

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDHD-209	ENST00000640554	PCDHB16	Q9NRJ7	776 aa		11.74	□□□□□ -0.53
SDHD-209	ENST00000640554	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.74	□□□□□ -0.53
SDHD-209	ENST00000640554	TRBV5-5	A0A0J9YX44	114 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	FUOM	A2VDF0	154 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554		F8VVB4	439 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554		F8VWA3	439 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	ZNF737	O75373	536 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	ATP6V1G2	O95670	118 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	HAND1	O96004	215 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	LALBA	P00709	142 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	TMEM225B	P0DP42	221 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	NPBWR2	P48146	333 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	MTNR1B	P49286	362 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	COL10A1	Q03692	680 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	MEF2C	Q06413	473 aa	Predicted RBP	11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	BAMBI	Q13145	260 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	GPR50	Q13585	617 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	DOCK11	Q5JSL3	2073 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	ELP2	Q6IA86	826 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	IZUMO2	Q6UXV1	221 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	GDPD3	Q7L5L3	318 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	VMO1	Q7Z5L0	202 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	CDH26	Q8IXH8	852 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	PHC2	Q8IXK0	858 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	BCL6B	Q8N143	479 aa	Predicted RBP	11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	OR8H2	Q8N162	312 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	MS4A15	Q8N5U1	240 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	ASCC1	Q8N9N2	400 aa	Known RBP	11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	CHST4	Q8NCG5	386 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	LHX4	Q969G2	390 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	GPER1	Q99527	375 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	DUSP21	Q9H596	190 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	RAB26	Q9ULW5	256 aa		11.73	□□□□□ -0.53
SDHD-209	ENST00000640554	IGHV3OR16-10	A0A075B7F0	116 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	SPRY1	O43609	319 aa	Predicted RBP	11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	INMT	O95050	263 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	RBP4	P02753	201 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	TFF1	P04155	84 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	PRKACA	P17612	351 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	CEL	P19835	753 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	BCL3	P20749	454 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	MAPK3	P27361	379 aa	Predicted RBP	11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	BDKRB2	P30411	391 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	VHL	P40337	213 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	UBE2E1	P51965	193 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	ZP1	P60852	638 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	SLC35A2	P78381	396 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	ASCL4	Q6XD76	172 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	FAM185A	Q8N0U4	392 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	TMEM86B	Q8N661	226 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554		Q8N7P7	452 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	ZDHHC22	Q8N966	263 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554		Q8NFD4	153 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	ZDHHC16	Q969W1	377 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	SLC25A28	Q96A46	364 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	PGLYRP3	Q96LB9	341 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	HEXA-AS1	Q9H8Q6	139 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	EXOSC4	Q9NPD3	245 aa	Known RBP	11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	RBFOX1	Q9NWB1	397 aa	Known RBP	11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	BLOC1S6	Q9UL45	172 aa		11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	SF3B6	Q9Y3B4	125 aa	Known RBP	11.72	□□□□□ -0.53
SDHD-209	ENST00000640554	IGKV1-12	A0A0C4DH73	117 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	hADV38S2	A0JD32	116 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	MGST3	O14880	152 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	ANGPTL7	O43827	346 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	ZNF780A	O75290	641 aa	Predicted RBP	11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	IGKV1D-12	P01611	117 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	LMO1	P25800	156 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	ERP29	P30040	261 aa	Known RBP	11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	CEBPD	P49716	269 aa	Predicted RBP	11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	RPS11	P62280	158 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	UBA52	P62987	128 aa	Known RBP	11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	SPHAR	Q15513	63 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	RBM48	Q5RL73	367 aa	Known RBP	11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	TMEM200B	Q69YZ2	307 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	BRD3OS	Q6XYD6	125 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	C17orf107	Q6ZR85	190 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	SATL1	Q86VE3	508 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	RFT1	Q96AA3	541 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	SPACA5	Q96QH8	159 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	S100A13	Q99584	98 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554		Q9H521	79 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	ISYNA1	Q9NPH2	558 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	C19orf12	Q9NSK7	152 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	TAS2R4	Q9NYW5	299 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	FOXJ3	Q9UPW0	622 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	FAM96B	Q9Y3D0	163 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	POMT1	Q9Y6A1	747 aa		11.71	□□□□□ -0.53
SDHD-209	ENST00000640554	TRBV5-7	A0A0A0MS05	114 aa		11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	MEGF11	A6BM72	1044 aa		11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	RGS10	O43665	173 aa		11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	RGS9	O75916	674 aa	Predicted RBP	11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	IGFBP3	P17936	291 aa	Predicted RBP	11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	FST	P19883	344 aa		11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	GABRR1	P24046	479 aa		11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	CRHBP	P24387	322 aa		11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	ZNF93	P35789	620 aa	Predicted RBP	11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	TGFBR2	P37173	567 aa		11.7	□□□□□ -0.54
SDHD-209	ENST00000640554	PTGFR	P43088	359 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 81 ms