RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 XKP51811 444 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 CLDN6P56747 220 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 IFFO1Q0D2I5 559 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 FADDQ13158 208 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 TPBGQ13641 420 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 ZBTB6Q15916 424 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 TAL2Q16559 108 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 GCSAMLQ5JQS6 135 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 DUPD1Q68J44 220 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 FAHD1Q6P587 224 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 AHSA2Q719I0 299 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 DAZ4Q86SG3 579 aaKnown RBP1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 ITFG1Q8TB96 612 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 PPP1R36Q96LQ0 422 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 COPS4Q9BT78 406 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 ARMC7Q9H6L4 198 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 IFT46Q9NQC8 304 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 DAZ1Q9NQZ3 744 aaKnown RBP1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 CLN6Q9NWW5 311 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 ZNF492Q9P255 531 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 PRELID1Q9Y255 219 aa1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 FARSAQ9Y285 508 aaKnown RBP1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 POLR3AO14802 1390 aaPredicted RBP1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 AQRO60306 1485 aaKnown RBP eCLIP1.93□□□□□ -2.1
SCAMP1-205ENST00000614488 TRAV8-7A0A075B6U6 113 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 GOLGA6L10A6NI86 522 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 HACD1B0YJ81 288 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 GPR171O14626 319 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 SGCEO43556 437 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 SULT1B1O43704 296 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 AHSA1O95433 338 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 IGLV2-8P01709 118 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 RAB7AP51149 207 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 VSNL1P62760 191 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 SLC35B1P78383 322 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 BNIP2Q12982 314 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 NAB1Q13506 487 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 OR4D1Q15615 310 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 C5orf64Q2M2E5 130 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 COQ5Q5HYK3 327 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 TMEM31Q5JXX7 168 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 CLVS2Q5SYC1 327 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 SSX6Q7RTT6 188 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 VKORC1L1Q8N0U8 176 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 DRAM1Q8N682 238 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 WDR31Q8NA23 367 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 OR10W1Q8NGF6 305 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 RNASEH2CQ8TDP1 164 aaKnown RBP1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 RERGQ96A58 199 aaPredicted RBP1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 SCGB3A2Q96PL1 93 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 TEAD3Q99594 435 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 DCUN1D5Q9BTE7 237 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 API5Q9BZZ5 524 aaKnown RBP1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 TRIM45Q9H8W5 580 aaPredicted RBP1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 WDR54Q9H977 334 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 MRM3Q9HC36 420 aaKnown RBP1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 TREX1Q9NSU2 369 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 NLE1Q9NVX2 485 aaPredicted RBP1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 MAT2BQ9NZL9 334 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 CYB5R1Q9UHQ9 305 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 FADS3Q9Y5Q0 445 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 NACADO15069 1562 aa1.92□□□□□ -2.1
SCAMP1-205ENST00000614488 RPRD2Q5VT52 1461 aaKnown RBP1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 TMEM213A2RRL7 107 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 GOLGA8JA6NMD2 632 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 A8MWL6 223 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 GOLGA8KD6RF30 607 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 GOLGA8MH3BSY2 632 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 CLDN34H7C241 214 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 TRAPPC6AO75865 159 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 PTTG1O95997 202 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 KRT7P08729 469 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 GOLGA8HP0CJ92 632 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 LIPCP11150 499 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 MLNP12872 115 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 MPIP34949 423 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 ARR3P36575 388 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 COILP38432 576 aaPredicted RBP1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 CDKN2CP42773 168 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 MAGEA3P43357 314 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 PPICP45877 212 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 FABP6P51161 128 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 VBP1P61758 197 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 B2MP61769 119 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 RPL31P62899 125 aaKnown RBP1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 STX5Q13190 355 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 DYNC1I2Q13409 638 aaKnown RBP1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 ZNHIT3Q15649 155 aaPredicted RBP1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 ACTL10Q5JWF8 245 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 HORMAD1Q86X24 394 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 TMEM25Q86YD3 366 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 SLC25A29Q8N8R3 303 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 ZNF738Q8NE65 137 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 OR6K6Q8NGW6 343 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 OR6K2Q8NGY2 324 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 OR51A7Q8NH64 312 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 CDS1Q92903 461 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 ADTRPQ96IZ2 230 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 CIB1Q99828 191 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms