RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 HSPE1-MOB4S4R3N1 261 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 TENM1Q9UKZ4 2725 aa13.68□□□□□ -0.22
USB1-211ENST00000565662 C17orf98A8MV24 154 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 SH2D1BO14796 132 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 MGST3O14880 152 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 SULT1B1O43704 296 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 ZNF737O75373 536 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 BAG2O95816 211 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 HAND1O96004 215 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 ZNF728P0DKX0 622 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 MYL12AP19105 171 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 ARHGDIBP52566 201 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 EDDM3BP56851 147 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 PDZK1IP1Q13113 114 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 PARP16Q8N5Y8 322 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 TSEN15Q8WW01 171 aaKnown RBP13.67□□□□□ -0.22
USB1-211ENST00000565662 THRSPQ92748 146 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 UBE2FQ969M7 185 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 C16orf95Q9H693 158 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 ELL3Q9HB65 397 aaPredicted RBP13.67□□□□□ -0.22
USB1-211ENST00000565662 FGF20Q9NP95 211 aaPredicted RBP13.67□□□□□ -0.22
USB1-211ENST00000565662 EXOSC4Q9NPD3 245 aaKnown RBP13.67□□□□□ -0.22
USB1-211ENST00000565662 CHCHD3Q9NX63 227 aaKnown RBP13.67□□□□□ -0.22
USB1-211ENST00000565662 PITPNC1Q9UKF7 332 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 RNF114Q9Y508 228 aa13.67□□□□□ -0.22
USB1-211ENST00000565662 IGKV1-27A0A075B6S5 117 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 M0QZ24 198 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 TSPAN9O75954 239 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 CSN2P05814 226 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 GABRR1P24046 479 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 NANOS3P60323 173 aaKnown RBP13.66□□□□□ -0.22
USB1-211ENST00000565662 KLRD1Q13241 179 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 GRK1Q15835 563 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 OR52W1Q6IF63 320 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 BRICD5Q6PL45 260 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 LHFPL3Q86UP9 236 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 GAL3ST2Q9H3Q3 398 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 TNFRSF19Q9NS68 423 aa13.66□□□□□ -0.22
USB1-211ENST00000565662 UBE2J1Q9Y385 318 aaPredicted RBP13.66□□□□□ -0.22
USB1-211ENST00000565662 EXOSC1Q9Y3B2 195 aaKnown RBP13.66□□□□□ -0.22
USB1-211ENST00000565662 SOX21Q9Y651 276 aaPredicted RBP13.66□□□□□ -0.22
USB1-211ENST00000565662 CLPXO76031 633 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 KDM4BO94953 1096 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 HCKP08631 526 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 PRKACAP17612 351 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 MINOS1Q5TGZ0 78 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 RPL22L1Q6P5R6 122 aaKnown RBP13.65□□□□□ -0.22
USB1-211ENST00000565662 RDH10Q8IZV5 341 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 OR52I1Q8NGK6 324 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 OR13C9Q8NGT0 318 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 GPR148Q8TDV2 347 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 RNF166Q96A37 237 aaPredicted RBP13.65□□□□□ -0.22
USB1-211ENST00000565662 CREB3L1Q96BA8 519 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 MALSU1Q96EH3 234 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 HMG20AQ9NP66 347 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 PCDHB16Q9NRJ7 776 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 ABCB10Q9NRK6 738 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 MINOS1-NBL1R4GNA1 71 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 DSCAML1Q8TD84 2053 aa13.65□□□□□ -0.22
USB1-211ENST00000565662 TRGV10A0A0A0MS01 117 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 IGKV1-9A0A0C4DH69 117 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 VGLL3A8MV65 326 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 RAB3AP20336 220 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 MTNR1BP49286 362 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 CEBPDP49716 269 aaPredicted RBP13.64□□□□□ -0.23
USB1-211ENST00000565662 TAS2R43P59537 309 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 TAF9Q16594 264 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 ZNF691Q5VV52 312 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 PXT1Q8NFP0 134 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 OR11H6Q8NGC7 330 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 OR4M1Q8NGD0 313 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 OR4C13Q8NGP0 309 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 PAK1IP1Q9NWT1 392 aaPredicted RBP13.64□□□□□ -0.23
USB1-211ENST00000565662 MYRFQ9Y2G1 1151 aa13.64□□□□□ -0.23
USB1-211ENST00000565662 H3BSH0 61 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 ZFPL1O95159 310 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 TFF1P04155 84 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 IGHV1-8P0DP01 117 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 BCL3P20749 454 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 OMGP23515 440 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 LMO1P25800 156 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 KCNJ3P48549 501 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 P2RX3P56373 397 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 PPP3R1P63098 170 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 ZNF273Q14593 569 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 ZNF626Q68DY1 528 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 RTN4RL2Q86UN3 420 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 DHRSXQ8N5I4 330 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 LINC01006Q8NI28 216 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 RPS4Y2Q8TD47 263 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 SSX3Q99909 188 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 CITED1Q99966 193 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 NPFFR1Q9GZQ6 430 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 RBFOX1Q9NWB1 397 aaKnown RBP13.63□□□□□ -0.23
USB1-211ENST00000565662 TAS2R3Q9NYW6 316 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 CKLFQ9UBR5 152 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 FBLN5Q9UBX5 448 aa13.63□□□□□ -0.23
USB1-211ENST00000565662 DIMT1Q9UNQ2 313 aaKnown RBP13.63□□□□□ -0.23
USB1-211ENST00000565662 SESN1Q9Y6P5 492 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms