RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TBPP20226 339 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 CA6P23280 308 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 HOXC12P31275 282 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 PPP1CBP62140 327 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 MRPL49Q13405 166 aaKnown RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 C4orf46Q504U0 113 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 KRTCAP3Q53RY4 240 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 C1orf185Q5T7R7 199 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 NLRC3Q7RTR2 1065 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 MUC20Q8N307 709 aaPredicted RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 LINC00469Q8N7U9 141 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 Q8NA96 180 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 OR10AD1Q8NGE0 317 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 OR5P3Q8WZ94 311 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 EMG1Q92979 244 aaKnown RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 NARS2Q96I59 477 aaKnown RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 REG4Q9BYZ8 158 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 ZNF436Q9C0F3 470 aaPredicted RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 SHARPINQ9H0F6 387 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 FN3KRPQ9HA64 309 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 F8VVB4 439 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 F8VWA3 439 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 IFNA6P05013 189 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 AMY2BP19961 511 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 BCL3P20749 454 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 CHATP28329 748 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 SNU13P55769 128 aaKnown RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 RBM11P57052 281 aaKnown RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 FBXW12Q6X9E4 464 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 ZSCAN4Q8NAM6 433 aaPredicted RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 OR5A2Q8NGI9 324 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 DYRK2Q92630 601 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 MRPS24Q96EL2 167 aaKnown RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 HS3ST6Q96QI5 342 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 SULT4A1Q9BR01 284 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 ALX4Q9H161 411 aaPredicted RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 IFT22Q9H7X7 185 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 MGAT4CQ9UBM8 478 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 AK3Q9UIJ7 227 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 HSF4Q9ULV5 492 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 IGKV1D-8A0A087WSZ0 117 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 MFSD2BA6NFX1 497 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 J3QW42 95 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 IL2RAP01589 272 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 OR4E1P0C645 316 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 UCP2P55851 309 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 ARL6IP1Q15041 203 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 C2orf68Q2NKX9 166 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 CISD2Q8N5K1 135 aaKnown RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 UXS1Q8NBZ7 420 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 HIST1H2AAQ96QV6 131 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 ZNF701Q9NV72 531 aaPredicted RBP8.06□□□□□ -1.12
LINC00838-201ENST00000562956 MTCH1Q9NZJ7 389 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 MPC1Q9Y5U8 109 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 NPTNQ9Y639 398 aa8.06□□□□□ -1.12
LINC00838-201ENST00000562956 L7N2F9 121 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 CA11O75493 328 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 CXCL2P19875 107 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 P2RY6Q15077 328 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 ALKBH6Q3KRA9 238 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 VAX1Q5SQQ9 334 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 ZNF474Q6S9Z5 364 aaPredicted RBP8.05□□□□□ -1.12
LINC00838-201ENST00000562956 BHLHA15Q7RTS1 189 aaPredicted RBP8.05□□□□□ -1.12
LINC00838-201ENST00000562956 SLC25A40Q8TBP6 338 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 FAM57AQ8TBR7 257 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 DMRTA2Q96SC8 542 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 UBE2QL1A1L167 161 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 SDCBPO00560 298 aaPredicted RBP8.05□□□□□ -1.12
LINC00838-201ENST00000562956 RRP8O43159 456 aaKnown RBP8.05□□□□□ -1.12
LINC00838-201ENST00000562956 SYNGR1O43759 233 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 CRHP06850 196 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 CECR9P0C854 216 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 ZNF35P13682 527 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 PTGER4P35408 488 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 TIMP3P35625 211 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 TDGF1P3P51864 188 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 PPA1Q15181 289 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 ACTBL2Q562R1 376 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 TMEM88Q6PEY1 159 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 HAGHLQ6PII5 290 aaPredicted RBP8.05□□□□□ -1.12
LINC00838-201ENST00000562956 BEND4Q6ZU67 534 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 SPICQ8N5J4 248 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 Q8NFD4 153 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 OR1J1Q8NGS3 322 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 OR5H2Q8NGV7 314 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 IL36RNQ9UBH0 155 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 PFDN2Q9UHV9 154 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 CACNA1GO43497 2377 aa8.05□□□□□ -1.12
LINC00838-201ENST00000562956 C3orf80F5H4A9 247 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 ARPC5O15511 151 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 NMBP08949 121 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 FAM87AP0C7U9 286 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 MPV17P39210 176 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 TMEM200AQ86VY9 491 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 SAXO1Q8IYX7 474 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 C17orf78Q8N4C9 275 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 RELL2Q8NC24 303 aaPredicted RBP8.04□□□□□ -1.12
LINC00838-201ENST00000562956 MARCH1Q8TCQ1 289 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 CCDC107Q8WV48 283 aa8.04□□□□□ -1.12
LINC00838-201ENST00000562956 MYOZ1Q9NP98 299 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms