RNA–Protein interactions for RNA: ENST00000553306.5

AL049779.1-201, humanhuman

TSL 2 BASIC

Gene AL049779.1, Length 670 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049779.1-201ENST00000553306 CBR1P16152 277 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 CSNK2A2P19784 350 aaPredicted RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 IMPDH1P20839 514 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 ARR3P36575 388 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 RPL13AP40429 203 aaKnown RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 ELK3P41970 407 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 SLC7A2P52569 658 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 CRYBA2P53672 197 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 PSMD4P55036 377 aaKnown RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 RAB25P57735 213 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 PSPHP78330 225 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 CDK16Q00536 496 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 RAB40BQ12829 278 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 SELENBP1Q13228 472 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 EIF2B1Q14232 305 aaKnown RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 FASTKD3Q14CZ7 662 aaKnown RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 KIAA1644Q3SXP7 199 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 KRT71Q3SY84 523 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 GTDC1Q4AE62 458 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 HSP90B2PQ58FF3 399 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 SEL1L2Q5TEA6 688 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 PLCXD3Q63HM9 321 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 MED27Q6P2C8 311 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 EMBQ6PCB8 327 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 FRA10AC1Q70Z53 315 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 ABHD12BQ7Z5M8 362 aaPredicted RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 MDP1Q86V88 176 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 CALHM3Q86XJ0 350 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 RNF130Q86XS8 419 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 ZNF101Q8IZC7 436 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 ZNRF1Q8ND25 227 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 OR7G2Q8NG99 324 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 OR13A1Q8NGR1 328 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 PIGXQ8TBF5 258 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 MAGEE2Q8TD90 523 aaPredicted RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 C11orf52Q96A22 123 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 SDSLQ96GA7 329 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 AURKBQ96GD4 344 aaPredicted RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 ALKBH3Q96Q83 286 aaPredicted RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 FMO2Q99518 471 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 ZNF649Q9BS31 505 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 NIPSNAP3BQ9BS92 247 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 C20orf24Q9BUV8 137 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 EFCAB11Q9BUY7 163 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 TSGA10Q9BZW7 698 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 MTHFD2LQ9H903 347 aaPredicted RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 IL1RAPQ9NPH3 570 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 EIF3KQ9UBQ5 218 aaKnown RBP3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 PITPNC1Q9UKF7 332 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 IKZF2Q9UKS7 526 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 STK38LQ9Y2H1 464 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 SNX24Q9Y343 169 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 STARD10Q9Y365 291 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 PEX16Q9Y5Y5 336 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 ZNF780BQ9Y6R6 833 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 KMT2AQ03164 3969 aa3.1□□□□□ -1.91
AL049779.1-201ENST00000553306 DOCK11Q5JSL3 2073 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 KIR2DS1A0A191URI9 304 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 ERI2A8K979 691 aaKnown RBP3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 H3BUX3 64 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 BMPR1BO00238 502 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 FBP2O00757 339 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 LSM1O15116 133 aaKnown RBP3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 BANF1O75531 89 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 TMEM50AO95807 157 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 FGGP02679 453 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 ZNF26P17031 533 aaPredicted RBP3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 ZNF43P17038 809 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 KITLGP21583 273 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 FCGR2CP31995 323 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 CFHR2P36980 270 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 SLC1A2P43004 574 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 SLC1A1P43005 524 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 FOXA1P55317 472 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 KLF3P57682 345 aaPredicted RBP3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 RAB11AP62491 216 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 RPL8P62917 257 aaKnown RBP3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 PAX5Q02548 391 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 PAX2Q02962 417 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 CKAP4Q07065 602 aaKnown RBP3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 LAGE3Q14657 143 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 SPA17Q15506 151 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 TOMM34Q15785 309 aaPredicted RBP3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 RAB11BQ15907 218 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 MRPL23Q16540 153 aaKnown RBP3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 TMEM155Q4W5P6 130 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 METTL11BQ5VVY1 283 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 FAM219BQ5XKK7 198 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 PVRIGQ6DKI7 326 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 AAED1Q7RTV5 226 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 SLC35F2Q8IXU6 374 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 STPG4Q8N801 248 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 C15orf54Q8N8G6 183 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 OR9A2Q8NGT5 310 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 SYNPRQ8TBG9 265 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 MARCH1Q8TCQ1 289 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 ACMSDQ8TDX5 336 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 C1orf54Q8WWF1 131 aa3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 GEMIN6Q8WXD5 167 aaKnown RBP3.09□□□□□ -1.91
AL049779.1-201ENST00000553306 UBE2E3Q969T4 207 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms