RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 OR2V1Q8NHB1 315 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 ISOC2Q96AB3 205 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 SIGLEC12Q96PQ1 595 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 SLC5A7Q9GZV3 580 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 DMXL1Q9Y485 3027 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 GJE1A6NN92 205 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 PET100P0DJ07 73 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 MUC1P15941 1255 aaPredicted RBP11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 TBPP20226 339 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 DUSP3P51452 185 aaPredicted RBP11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 SLC25A53Q5H9E4 307 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 KRBOX4Q5JUW0 171 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 VAX1Q5SQQ9 334 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 DHRS13Q6UX07 377 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 ZNF565Q8N9K5 539 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 LHFPL5Q8TAF8 219 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 CLDN23Q96B33 292 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 OCSTAMPQ9BR26 566 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 RAB18Q9NP72 206 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 RPS10P5Q9NQ39 176 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 TIMM10BQ9Y5J6 103 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 CPAMD8Q8IZJ3 1885 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 NPIPB13A6NJU9 1138 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 NPIPB4C9JG80 1138 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 TSPAN15O95858 294 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 OR8U9P0C7N5 309 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 PRKACAP17612 351 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 CBX5P45973 191 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 CAMLGP49069 296 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 HOXA4Q00056 320 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 PNLIPRP3Q17RR3 467 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 LDLRAD3Q86YD5 345 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 SVBPQ8N300 66 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 CPEB3Q8NE35 698 aaKnown RBP11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 OR8U1Q8NH10 309 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 MARVELD3Q96A59 401 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 NECAP2Q9NVZ3 263 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 CRIM1Q9NZV1 1036 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 OSGIN2Q9Y236 505 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 CER1O95813 267 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 APOC1P02654 83 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 OR13C7P0DN81 318 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 NAT2P11245 290 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 PRF1P14222 555 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 ADCYAP1P18509 176 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 ZNF345Q14585 488 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 FAM27BQ5VT28 67 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 NSUN5P2Q63ZY6 315 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 PPP1R32Q7Z5V6 425 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 GCNT2Q8N0V5 402 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 SGCZQ96LD1 299 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 SH3BGRL3Q9H299 93 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 DMXL2Q8TDJ6 3036 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 FCGR3AP08637 254 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 ZNF44P15621 663 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 ZNF708P17019 499 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 AADACP22760 399 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 RAB35Q15286 201 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 FAM189A2Q15884 450 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 C6orf15Q6UXA7 325 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 TMEM182Q6ZP80 229 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 FAM213BQ8TBF2 198 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 HIST1H2AAQ96QV6 131 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 NMES1Q9C002 83 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 OR2H1Q9GZK4 316 aa11.85□□□□□ -0.51
PRPF40B-209ENST00000548825 DNASE2O00115 360 aaPredicted RBP11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 WRBO00258 174 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 HSPA12AO43301 675 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 BCL3P20749 454 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 MRPS34P82930 218 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 COL19A1Q14993 1142 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 OR4A4PQ8NGN8 299 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 Q96M66 194 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 PRRX2Q99811 253 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 FAM117AQ9C073 453 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 WNT5BQ9H1J7 359 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 ZNF286AQ9HBT8 521 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 FIGNL2A6NMB9 653 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 SSSCA1O60232 199 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 CFPP27918 469 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 PDZK1IP1Q13113 114 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 HIST3H3Q16695 136 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 ZNF529Q6P280 563 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 CXorf67Q86X51 503 aaPredicted RBP11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 PLPPR2Q96GM1 343 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 DNTTIP1Q9H147 329 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 GPR35Q9HC97 309 aa11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 SPTAN1Q13813 2472 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-209ENST00000548825 FAM24AA6NFZ4 105 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF732B4DXR9 585 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 SFTA3P0C7M3 94 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 RPS16P62249 146 aaKnown RBP11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 POLR2GP62487 172 aaKnown RBP eCLIP11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 ZXDAP98168 799 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 HIKESHIQ53FT3 197 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF695Q8IW36 515 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 BCO1Q9HAY6 547 aa11.83□□□□□ -0.52
PRPF40B-209ENST00000548825 BARX1Q9HBU1 254 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms