RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SLC25A38Q96DW6 304 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 DNAJC1Q96KC8 554 aaKnown RBP3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 SLC29A1Q99808 456 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR8D2Q9GZM6 311 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 C20orf85Q9H1P6 137 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 DHX35Q9H5Z1 703 aaKnown RBP3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 SIAEQ9HAT2 523 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 CCDC59Q9P031 241 aaKnown RBP3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 OPN4Q9UHM6 478 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 VSIG4Q9Y279 399 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 COQ4Q9Y3A0 265 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 GOLT1BQ9Y3E0 138 aa3.45□□□□□ -1.86
HMGB1P23-201ENST00000518743 RNF213Q63HN8 5207 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 LYRM9A8MSI8 78 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 SRRM5B3KS81 715 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 PPP1R2P9O14990 202 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 CCNB2O95067 398 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 IGHV3-23P01764 117 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 FGGP02679 453 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 CCDC172P0C7W6 258 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 CPN2P22792 545 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 GABRR1P24046 479 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 BMI1P35226 326 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 IDH3GP51553 393 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 CARD18P57730 90 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 TAS2R19P59542 299 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF791Q3KP31 576 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 BHLHA15Q7RTS1 189 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 CMC1Q7Z7K0 106 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 TMEM179BQ7Z7N9 219 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 LHFPL3Q86UP9 236 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 APRG1Q8IVJ8 170 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 WDFY1Q8IWB7 410 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 FAM71AQ8IYT1 594 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 NKAPP1Q8N9T2 125 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 TMEM35BQ8NCS4 154 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR1N2Q8NGR9 330 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR1J4Q8NGS1 313 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR8K3Q8NH51 312 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 GTSF1Q8WW33 167 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 POP5Q969H6 163 aaKnown RBP3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 C18orf15Q96N68 181 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 ARHGDIGQ99819 225 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 ECSITQ9BQ95 431 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 NAT9Q9BTE0 207 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 ROGDIQ9GZN7 287 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR51M1Q9H341 326 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 RNF122Q9H9V4 155 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 PROK2Q9HC23 129 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 LYRM4Q9HD34 91 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 FGF20Q9NP95 211 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 DYNLRB1Q9NP97 96 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZC4H2Q9NQZ6 224 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 AIG1Q9NVV5 245 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 RBM22Q9NW64 420 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 ABCD2Q9UBJ2 740 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 LGALS13Q9UHV8 139 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 SOX21Q9Y651 276 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 CHCHD2Q9Y6H1 151 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 COMMD3-BMI1R4GMX3 469 aa3.44□□□□□ -1.86
HMGB1P23-201ENST00000518743 HSPG2P98160 4391 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 IGKV1D-8A0A087WSZ0 117 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 A0A0G2JRQ6 117 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 PVALEFA0A1B0GWK0 134 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 BOLA2-SMG1P6H3BVE0 249 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 TP53I11O14683 189 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 LIN7AO14910 233 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 HAT1O14929 419 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 CETN3O15182 167 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 CHST10O43529 356 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF780AO75290 641 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 LYZL6O75951 148 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 HLA-HP01893 362 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF708P17019 499 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 COX7A1P24310 79 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 RPA3P35244 121 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 LHX2P50458 406 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 SUB1P53999 127 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 SKP1P63208 163 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 LCN2P80188 198 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 EMX1Q04741 257 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 EGFEM1PQ0D2K5 195 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 ECH1Q13011 328 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 MRPL23Q16540 153 aaKnown RBP3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 C14orf177Q52M58 125 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 HIKESHIQ53FT3 197 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 AGBL2Q5U5Z8 902 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 AADACL4Q5VUY2 407 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 RSBN1Q5VWQ0 802 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF836Q6ZNA1 936 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 GLT6D1Q7Z4J2 308 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 GTSCR1Q86UQ5 136 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 C8orf31Q8N9H6 132 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR1S2Q8NGQ3 325 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 JOSD2Q8TAC2 188 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 DTX3LQ8TDB6 740 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 SKA2Q8WVK7 121 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 GIMAP1Q8WWP7 306 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 LRRC39Q96DD0 335 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 VSIG2Q96IQ7 327 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms