RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PARP16	Q8N5Y8	322 aa		10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	TNFAIP8L1	Q8WVP5	186 aa		10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	UFD1	Q92890	307 aa		10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	OR14A2	Q96R54	314 aa		10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	OR5M11	Q96RB7	305 aa		10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	S100A13	Q99584	98 aa		10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	MS4A7	Q9GZW8	240 aa	Predicted RBP	10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	GLS2	Q9UI32	602 aa		10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	GSTK1	Q9Y2Q3	226 aa		10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	PCDHGB5	Q9Y5G0	923 aa		10.49	□□□□□ -0.73
FDPS-204	ENST00000461507	ZNF879	B4DU55	563 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507		F8VVB4	439 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507		F8VWA3	439 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	NOS1AP	O75052	506 aa	Predicted RBP	10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	KNG1	P01042	644 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	MAS1	P04201	325 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	SFTPB	P07988	381 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	AMY2B	P19961	511 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	GABRR1	P24046	479 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	CRHBP	P24387	322 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	MAP2K4	P45985	399 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	NPBWR2	P48146	333 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	EDDM3B	P56851	147 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	SLC35A2	P78381	396 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	COL10A1	Q03692	680 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	EDDM3A	Q14507	147 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	SPHAR	Q15513	63 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	KISS1	Q15726	138 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	C11orf91	Q3C1V1	193 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	PRR31	Q5SQ13	230 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	GPR157	Q5UAW9	335 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	SHISA2	Q6UWI4	295 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	RNF144B	Q7Z419	303 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	CMTM4	Q8IZR5	234 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	FAM58A	Q8N1B3	248 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	ZNF561	Q8N587	486 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	CD177	Q8N6Q3	437 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	OR4M1	Q8NGD0	313 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	OR52N4	Q8NGI2	321 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	SLC25A28	Q96A46	364 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	PGLYRP3	Q96LB9	341 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	NR1H4	Q96RI1	486 aa	Predicted RBP	10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	CDCA4	Q9BXL8	241 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	CNTD2	Q9H8S5	307 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	IL36RN	Q9UBH0	155 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	ZNF222	Q9UK12	451 aa		10.48	□□□□□ -0.73
FDPS-204	ENST00000461507	SIRPB1	O00241	398 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	GPR37	O15354	613 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	FCN3	O75636	299 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	HAND1	O96004	215 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	LIPF	P07098	398 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	MMP9	P14780	707 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	ZNF44	P15621	663 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	MAPK3	P27361	379 aa	Predicted RBP	10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	BDKRB2	P30411	391 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	PRB3	Q04118	309 aa	Predicted RBP	10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	BLMH	Q13867	455 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	RSU1	Q15404	277 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	LIPK	Q5VXJ0	399 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	JAGN1	Q8N5M9	183 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	OR10K1	Q8NGX5	313 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	RPS4Y2	Q8TD47	263 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	LHX4	Q969G2	390 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	SDSL	Q96GA7	329 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	WDFY2	Q96P53	400 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	DCTN5	Q9BTE1	182 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	CHST6	Q9GZX3	395 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	ZNF696	Q9H7X3	374 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	HES4	Q9HCC6	221 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	EXOSC4	Q9NPD3	245 aa	Known RBP	10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	TMEM138	Q9NPI0	162 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	SIRT7	Q9NRC8	400 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	ING3	Q9NXR8	418 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	ING4	Q9UNL4	249 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	MAB21L2	Q9Y586	359 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	SOX21	Q9Y651	276 aa	Predicted RBP	10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	TRRAP	Q9Y4A5	3859 aa		10.47	□□□□□ -0.73
FDPS-204	ENST00000461507	TRBV5-5	A0A0J9YX44	114 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	MEX3A	A1L020	520 aa	Known RBP	10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	GABRP	O00591	440 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	HTR3B	O95264	441 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	CHRM2	P08172	466 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	ZNF93	P35789	620 aa	Predicted RBP	10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	OR3A4P	P47883	348 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	ERVK11-1	P61568	191 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	BDH1	Q02338	343 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	DOC2B	Q14184	412 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	BRD3OS	Q6XYD6	125 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	GDPD3	Q7L5L3	318 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	PRSS48	Q7RTY5	328 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	VMO1	Q7Z5L0	202 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	ZNF485	Q8NCK3	441 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	TMEM203	Q969S6	136 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	DUX5	Q96PT3	197 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	TBX15	Q96SF7	602 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	NOX4	Q9NPH5	578 aa		10.46	□□□□□ -0.73
FDPS-204	ENST00000461507	MMP24	Q9Y5R2	645 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms