RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 KIAA1456Q9P272 454 aa14.7□□□□□ -0.06
PMS1-213ENST00000441310 COA3Q9Y2R0 106 aaPredicted RBP14.7□□□□□ -0.06
PMS1-213ENST00000441310 MRPS18CQ9Y3D5 142 aaKnown RBP14.7□□□□□ -0.06
PMS1-213ENST00000441310 TGOLN2O43493 480 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 CRTAPO75718 401 aaPredicted RBP14.69□□□□□ -0.06
PMS1-213ENST00000441310 SCGB1D1O95968 90 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 FOLR1P15328 257 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 MMP16P51512 607 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 ZNF117Q03924 483 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 CD226Q15762 336 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 ACKR1Q16570 336 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 CHRFAM7AQ494W8 412 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 SLC35E3Q7Z769 313 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 HLA-CQ95604 372 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 ADOQ96SZ5 270 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 FAAP24Q9BTP7 215 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 WNT5BQ9H1J7 359 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 MRPS28Q9Y2Q9 187 aaKnown RBP14.69□□□□□ -0.06
PMS1-213ENST00000441310 MED12Q93074 2177 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 PRSS37A4D1T9 235 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 LILRA5A6NI73 299 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 METTL15P1P0C7V9 234 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 PNMTP11086 282 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 RAB35Q15286 201 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 CLEC12BQ2HXU8 276 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.69□□□□□ -0.06
PMS1-213ENST00000441310 SLC25A45Q8N413 288 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 ZNF701Q9NV72 531 aaPredicted RBP14.69□□□□□ -0.06
PMS1-213ENST00000441310 MYOTQ9UBF9 498 aa14.69□□□□□ -0.06
PMS1-213ENST00000441310 CHD3Q12873 2000 aaKnown RBP14.68□□□□□ -0.06
PMS1-213ENST00000441310 ZNF205O95201 554 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 TK1P04183 234 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 OR3A4PP47883 348 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 NECAP1Q8NC96 275 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 DIRC2Q96SL1 478 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 TMEM59Q9BXS4 323 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 BGLAPP02818 100 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 EFNA3P52797 238 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 OR1L3Q8NH93 324 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 PTPMT1Q8WUK0 201 aaPredicted RBP14.68□□□□□ -0.06
PMS1-213ENST00000441310 ZNF2Q9BSG1 426 aaPredicted RBP14.68□□□□□ -0.06
PMS1-213ENST00000441310 VN1R1Q9GZP7 353 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 PRDM6Q9NQX0 595 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 GPR173Q9NS66 373 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 PCNX3Q9H6A9 2034 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 FOSL2P15408 326 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 ZNF774Q6NX45 483 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 LYZL2Q7Z4W2 148 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 OR10A7Q8NGE5 316 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 OR52M1Q8NGK5 317 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 NUDT22Q9BRQ3 303 aa14.68□□□□□ -0.06
PMS1-213ENST00000441310 TMEM131Q92545 1883 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 CDC14BO60729 498 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 SRSF10O75494 262 aaKnown RBP14.67□□□□□ -0.06
PMS1-213ENST00000441310 TSPO2Q5TGU0 170 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 SNIP1Q8TAD8 396 aaKnown RBP14.67□□□□□ -0.06
PMS1-213ENST00000441310 TOMM40LQ969M1 308 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 CDH20Q9HBT6 801 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 SRPK3Q9UPE1 567 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 NCOR1O75376 2440 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 IGHV1OR21-1A0A087WYE8 117 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 IGLV1-36A0A0B4J1U3 117 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 TCF21O43680 179 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 CA11O75493 328 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 HSPB1P04792 205 aaKnown RBP14.67□□□□□ -0.06
PMS1-213ENST00000441310 CST2P09228 141 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 LINC00614P0C842 121 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 FGF5P12034 268 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 POLR2HP52434 150 aaKnown RBP14.67□□□□□ -0.06
PMS1-213ENST00000441310 FUT7Q11130 342 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 THEM4Q5T1C6 240 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 FBXW12Q6X9E4 464 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 ZNF66Q6ZN08 573 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 CPEB2Q7Z5Q1 589 aaKnown RBP14.67□□□□□ -0.06
PMS1-213ENST00000441310 COMMD2Q86X83 199 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 POC1BQ8TC44 478 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 SLC7A11Q9UPY5 501 aa14.67□□□□□ -0.06
PMS1-213ENST00000441310 IGHV3-20A0A0C4DH32 117 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 CD55P08174 381 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 H2BFMP0C1H6 154 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 OR5AC1P0C628 307 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 NOVA1P51513 510 aaKnown RBP14.66□□□□□ -0.06
PMS1-213ENST00000441310 NSDHLQ15738 373 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 TAF9Q16594 264 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 IQCJQ1A5X6 159 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 GPR157Q5UAW9 335 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 RHBDD1Q8TEB9 315 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 ASCL3Q9NQ33 180 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 ANAPC10Q9UM13 185 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 WDFY3Q8IZQ1 3526 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 FAM230AA0A1W2PPH8 454 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 FAM24AA6NFZ4 105 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 ZNF823P16415 610 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 GABRR1P24046 479 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 TAS2R46P59540 309 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 LIPHQ8WWY8 451 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 GPER1Q99527 375 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 RTN4RQ9BZR6 473 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 FER1L5A0AVI2 2057 aa14.66□□□□□ -0.06
PMS1-213ENST00000441310 IGKV1D-8A0A087WSZ0 117 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms