RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ERRFI1Q9UJM3 462 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-202ENST00000373779 ISG15P05161 165 aa15.34■□□□□ 0.05
PTPRU-202ENST00000373779 BTCP35070 178 aa15.34■□□□□ 0.05
PTPRU-202ENST00000373779 RPS4XP62701 263 aaKnown RBP15.34■□□□□ 0.05
PTPRU-202ENST00000373779 CD200P41217 278 aa15.34■□□□□ 0.05
PTPRU-202ENST00000373779 GNG3P63215 75 aa15.34■□□□□ 0.05
PTPRU-202ENST00000373779 PUSL1Q8N0Z8 303 aaKnown RBP15.34■□□□□ 0.05
PTPRU-202ENST00000373779 SCARF2Q96GP6 870 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-202ENST00000373779 TAAR6Q96RI8 345 aa15.34■□□□□ 0.05
PTPRU-202ENST00000373779 RCC1P18754 421 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-202ENST00000373779 ZNF816Q0VGE8 651 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-202ENST00000373779 ZNF574Q6ZN55 896 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-202ENST00000373779 RGP1Q92546 391 aaPredicted RBP15.34■□□□□ 0.05
PTPRU-202ENST00000373779 NRIP2Q9BQI9 281 aa15.34■□□□□ 0.05
PTPRU-202ENST00000373779 RYDENQ9NUL5 291 aaKnown RBP15.34■□□□□ 0.05
PTPRU-202ENST00000373779 LOXL2Q9Y4K0 774 aa15.34■□□□□ 0.05
PTPRU-202ENST00000373779 OR2M5A3KFT3 312 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 GEMIN2O14893 280 aaKnown RBP15.33■□□□□ 0.05
PTPRU-202ENST00000373779 TSPAN2O60636 221 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 FGF2P09038 288 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 ZNF90Q03938 601 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 SLC10A1Q14973 349 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 HLA-BQ31612 363 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 OR2A2Q6IF42 318 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 CHST5Q9GZS9 411 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 OR5AC2Q9NZP5 309 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 ARID1AO14497 2285 aa15.33■□□□□ 0.05
PTPRU-202ENST00000373779 ZNF98A6NK75 572 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 SMIM6P0DI80 62 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 IL11RAQ14626 422 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 TDHQ8IZJ6 230 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 MENTQ9BUN1 341 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 MTCH1Q9NZJ7 389 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 RPH3ALQ9UNE2 315 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 TOX3O15405 576 aaPredicted RBP15.33■□□□□ 0.04
PTPRU-202ENST00000373779 IL9P15248 144 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 TBC1D26Q86UD7 250 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 RAB33BQ9H082 229 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 SLC2A9Q9NRM0 540 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 SLC25A6P12236 298 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 SPATA46Q5T0L3 261 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 GALMQ96C23 342 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF251Q9BRH9 671 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 CDK2AP1O14519 115 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 LMX1BO60663 402 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 DYNLT3P51808 116 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 TMEM255AQ5JRV8 349 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 BTNL8Q6UX41 500 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 OR8U1Q8NH10 309 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 LPAR5Q9H1C0 372 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 SLC26A1Q9H2B4 701 aa15.33■□□□□ 0.04
PTPRU-202ENST00000373779 MUC1P15941 1255 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-202ENST00000373779 RAB5AP20339 215 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 FCARP24071 287 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 OR10D3Q8NH80 312 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 LINC01387J3KSC0 135 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 RAB4AP20338 218 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 OR8B8Q15620 311 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 WDR74Q6RFH5 385 aaPredicted RBP15.32■□□□□ 0.04
PTPRU-202ENST00000373779 MOB1BQ7L9L4 216 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 LYZL2Q7Z4W2 148 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 RBMXL3Q8N7X1 1067 aaKnown RBP15.32■□□□□ 0.04
PTPRU-202ENST00000373779 LIPGQ9Y5X9 500 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 MASP2O00187 686 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 PHOX2AO14813 284 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 SULT1A1P50225 295 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 IL24Q13007 206 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 OR13G1Q8NGZ3 307 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF205O95201 554 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 SEC11BP0C7V7 166 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 HNF1AP20823 631 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 FDX2Q6P4F2 183 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 FAM210BQ96KR6 192 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 GPR132Q9UNW8 380 aa15.32■□□□□ 0.04
PTPRU-202ENST00000373779 HLA-DRB3P79483 266 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 CACNG5Q9UF02 275 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 DOCK4Q8N1I0 1966 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 MAP1LC3B2A6NCE7 125 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 CTSBP07858 339 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 SRD5A2P31213 254 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.31■□□□□ 0.04
PTPRU-202ENST00000373779 SLC36A1Q7Z2H8 476 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 FAM58AQ8N1B3 248 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 OR2M3Q8NG83 312 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF519Q8TB69 540 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 MAP1LC3BQ9GZQ8 125 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 GAS1P54826 345 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 OR10V1Q8NGI7 309 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 CDRT15L2A8MXV6 281 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 HOXD4P09016 255 aaPredicted RBP15.31■□□□□ 0.04
PTPRU-202ENST00000373779 RPS11P62280 158 aaKnown RBP eCLIP15.31■□□□□ 0.04
PTPRU-202ENST00000373779 EWSR1Q01844 656 aaKnown RBP eCLIP15.31■□□□□ 0.04
PTPRU-202ENST00000373779 SLC38A11Q08AI6 406 aa15.31■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF320A2RRD8 509 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 MBPP02686 304 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-202ENST00000373779 RAC3P60763 192 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 NCMAPQ5T1S8 102 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF468Q5VIY5 522 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-202ENST00000373779 UBALD1Q8TB05 177 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 KCNK17Q96T54 332 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms