RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 DMRTA2Q96SC8 542 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 GAS2L1Q99501 681 aaPredicted RBP11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 LOC390937A0A1W2PQ73 354 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 OR6C6A6NF89 314 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF814B7Z6K7 855 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 H3BQ15 152 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 HS3ST1O14792 307 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 CXCL13O43927 109 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 MBPP02686 304 aaPredicted RBP11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 DTYMKP23919 212 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 EXT1Q16394 746 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 RHBDD2Q6NTF9 364 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 KCNIP4Q6PIL6 250 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 BRWD1Q9NSI6 2320 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 IGHV1OR15-9A0A0B4J2B8 117 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 GEMIN2O14893 280 aaKnown RBP11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 SPANXN5Q5MJ07 72 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 OR5AS1Q8N127 324 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 SMIM7Q9BQ49 75 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 KLHDC3Q9BQ90 382 aa11.18□□□□□ -0.62
DNMT3A-202ENST00000321117 SEC14L6B5MCN3 397 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 CLDN34H7C241 214 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 IAPPP10997 89 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 MPZP25189 248 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 HAAOP46952 286 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 CEACAM16Q2WEN9 425 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 OR51M1Q9H341 326 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 MCTS1Q9ULC4 181 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 ASXL3Q9C0F0 2248 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 AQP7P3A6NL99 342 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 PHOX2AO14813 284 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 YKT6O15498 198 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 LINC00271P0C7V0 271 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 PGA4P0DJD7 388 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 ATP6V0CP27449 155 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 NOVA1P51513 510 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 TMEM50BP56557 158 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 TGIF1Q15583 401 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 PLPPR5Q32ZL2 321 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 NSUN5P2Q63ZY6 315 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 NECAP1Q8NC96 275 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 AGBL5Q8NDL9 886 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 C10orf35Q96D05 121 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 FAM210BQ96KR6 192 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 IP6K3Q96PC2 410 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 OSGIN2Q9Y236 505 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 SDK2Q58EX2 2172 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 NPIPB13A6NJU9 1138 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 C2CD4DB7Z1M9 353 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 NPIPB4C9JG80 1138 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 LDLRAD4O15165 306 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 TUSC2O75896 110 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 YIF1AO95070 293 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 PRF1P14222 555 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF32P17041 273 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 SNCAP37840 140 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 TAS2R30P59541 319 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 SMAD4Q13485 552 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 ETV3LQ6ZN32 361 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 DYRK2Q92630 601 aa11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 RPUSD4Q96CM3 377 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-202ENST00000321117 A0A1W2PPV4 95 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 CRYM-AS1A6NIL9 109 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 DHRS7CA6NNS2 312 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 RNF212BA8MTL3 300 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 MPPED1O15442 326 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 CDS2O95674 445 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 PATE4P0C8F1 98 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 IL2RGP31785 369 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 FHITP49789 147 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 SDSLQ96GA7 329 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 RTBDNQ9BSG5 229 aaPredicted RBP11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 SOX7Q9BT81 388 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 WBP1LQ9NX94 342 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 NKX2-6A6NCS4 301 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 PPYP01298 95 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 PNLIPP16233 465 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 CXCL12P48061 93 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 DSCR4P56555 118 aaPredicted RBP11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 HLA-DRB3P79483 266 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 DLK1P80370 383 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 BAXQ07812 192 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 CSRP2Q16527 193 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 CST9LP1Q5W188 147 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 LYSMD4Q5XG99 296 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 SLC25A47Q6Q0C1 308 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 BIVMQ86UB2 503 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 SLC35G3Q8N808 338 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 RASL10BQ96S79 203 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 FOXB1Q99853 325 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 CACFD1Q9UGQ2 172 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 WDR1O75083 606 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 NPIPB7O75200 414 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 CD200P41217 278 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 DYNLT3P51808 116 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 ERGIC1Q969X5 290 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 PISDQ9UG56 409 aa11.16□□□□□ -0.62
DNMT3A-202ENST00000321117 STARD10Q9Y365 291 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms