RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 SIRT4Q9Y6E7 314 aaPredicted RBP17.1■□□□□ 0.33
HCFC1R1-208ENST00000575214 F8VVB4 439 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 F8VWA3 439 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 OGG1O15527 345 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 SPRY1O43609 319 aaPredicted RBP17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 HCKP08631 526 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 HILS1P60008 231 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 C6orf141Q5SZD1 244 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 IZUMO2Q6UXV1 221 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 Q8IYB0 196 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 BCL6BQ8N143 479 aaPredicted RBP17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 ZFP41Q8N8Y5 198 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 EMG1Q92979 244 aaKnown RBP17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 JMJD8Q96S16 334 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 TBX15Q96SF7 602 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 SIRPDQ9H106 197 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 KPTNQ9Y664 436 aa17.09■□□□□ 0.33
HCFC1R1-208ENST00000575214 A0A1W2PQ09 198 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 SULT1B1O43704 296 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 CD2P06729 351 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 PDZK1IP1Q13113 114 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 RBMS3Q6XE24 437 aaKnown RBP17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 PHC2Q8IXK0 858 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 CMTM4Q8IZR5 234 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 SIGLECL1Q8N7X8 197 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 ZNF485Q8NCK3 441 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 OR5D18Q8NGL1 313 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 C8orf46Q8TAG6 207 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 FKBP14Q9NWM8 211 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 ZNF281Q9Y2X9 895 aa17.08■□□□□ 0.32
HCFC1R1-208ENST00000575214 PTGES3LE9PB15 166 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 ATP6V1G2O95670 118 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 BCL3P20749 454 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 TAS2R43P59537 309 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 PDCD1Q15116 288 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 DMKNQ6E0U4 476 aaPredicted RBP17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 FIP1L1Q6UN15 594 aaKnown RBP17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 BRD3OSQ6XYD6 125 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 GHSRQ92847 366 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 TMEM106AQ96A25 262 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 DMRTB1Q96MA1 342 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 C19orf24Q9BVV8 132 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 RBFOX1Q9NWB1 397 aaKnown RBP17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 SCN3BQ9NY72 215 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 ERGIC3Q9Y282 383 aa17.07■□□□□ 0.32
HCFC1R1-208ENST00000575214 PNMA8CA0A1B0GUJ8 204 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 ANGPTL7O43827 346 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 ALX3O95076 343 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 CDK1P06493 297 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 RAB3AP20336 220 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 MYF6P23409 242 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 NPBWR2P48146 333 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 HSPA13P48723 471 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 WNT4P56705 351 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 COL10A1Q03692 680 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 RNF144BQ7Z419 303 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 VMO1Q7Z5L0 202 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 FAM185AQ8N0U4 392 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 KIR3DL3Q8N743 410 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 ASCC1Q8N9N2 400 aaKnown RBP17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 LHX4Q969G2 390 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 ANKRD60Q9BZ19 345 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 TAS2R4Q9NYW5 299 aa17.06■□□□□ 0.32
HCFC1R1-208ENST00000575214 TRBV23-1A0A0A0MS06 115 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 MAGEB3O15480 346 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 CHRM2P08172 466 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 CALCBP10092 127 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 PRKACAP17612 351 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 RIPK1Q13546 671 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 KISS1Q15726 138 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 RUSC1-AS1Q66K80 236 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 C9orf139Q6ZV77 190 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 FAM58AQ8N1B3 248 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 NANOGP1Q8N7R0 232 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 OR13C5Q8NGS8 318 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 MYDGFQ969H8 173 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 IL36RNQ9UBH0 155 aa17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 SOX21Q9Y651 276 aaPredicted RBP17.05■□□□□ 0.32
HCFC1R1-208ENST00000575214 CENPVL3A0A0U1RRI6 287 aa17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 TK1P04183 234 aa17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 SNU13P55769 128 aaKnown RBP17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 BPIFB3P59826 476 aa17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 YIF1BQ5BJH7 314 aa17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 PDZD9Q8IXQ8 264 aa17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 OR51A2Q8NGJ7 313 aa17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 CPNE2Q96FN4 548 aaPredicted RBP17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 PGLYRP3Q96LB9 341 aa17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 ZNF48Q96MX3 618 aaPredicted RBP17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 FAM234AQ9H0X4 552 aa17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 SIRT7Q9NRC8 400 aa17.04■□□□□ 0.32
HCFC1R1-208ENST00000575214 IGKV1-12A0A0C4DH73 117 aa17.03■□□□□ 0.32
HCFC1R1-208ENST00000575214 TRIM77I1YAP6 450 aa17.03■□□□□ 0.32
HCFC1R1-208ENST00000575214 HAND1O96004 215 aa17.03■□□□□ 0.32
HCFC1R1-208ENST00000575214 IGKV1D-12P01611 117 aa17.03■□□□□ 0.32
HCFC1R1-208ENST00000575214 TMEM225BP0DP42 221 aa17.03■□□□□ 0.32
HCFC1R1-208ENST00000575214 RPL31P62899 125 aaKnown RBP17.03■□□□□ 0.32
HCFC1R1-208ENST00000575214 PPP3R1P63098 170 aa17.03■□□□□ 0.32
HCFC1R1-208ENST00000575214 ASPHD2Q6ICH7 369 aa17.03■□□□□ 0.32
HCFC1R1-208ENST00000575214 CRIP3Q6Q6R5 217 aa17.03■□□□□ 0.32
HCFC1R1-208ENST00000575214 SATL1Q86VE3 508 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms