RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 HOXA5P20719 270 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 GPX4P36969 197 aaPredicted RBP12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 FAM69BQ5VUD6 431 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 RAB39BQ96DA2 213 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 TM2D1Q9BX74 207 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 MMP17Q9ULZ9 603 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 TGIF2-C20orf24A0A0A6YYL0 155 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 CCDC85CA6NKD9 419 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 H3BQ15 152 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 K7N7A8 449 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 DRD1P21728 446 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 CHATP28329 748 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 ZNF41P51814 821 aaPredicted RBP12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 ERVFRD-1P60508 538 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 PLPPR5Q32ZL2 321 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 SNAI3Q3KNW1 292 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 OR10G3Q8NGC4 313 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 SLC2A9Q9NRM0 540 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 PPP4R1LQ9P1A2 415 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 SDK2Q58EX2 2172 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 ABCA7Q8IZY2 2146 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 IGHV3-15A0A0B4J1V0 119 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 FAM230AA0A1W2PPH8 454 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 RAB5CP51148 216 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 CLDN17P56750 224 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 ZNF674Q2M3X9 581 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 TMEM176BQ3YBM2 270 aaPredicted RBP12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 COMMD1Q8N668 190 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 HAS2Q92819 552 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 NTNG2Q96CW9 530 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 ZDHHC12Q96GR4 267 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 C8orf33Q9H7E9 229 aaPredicted RBP12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 KCNIP3Q9Y2W7 256 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 DMRT1Q9Y5R6 373 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 LIPGQ9Y5X9 500 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 HS3ST3B1Q9Y662 390 aa12.13□□□□□ -0.47
SCNN1A-215ENST00000540037 EXPH5Q8NEV8 1989 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 ZNF729A6NN14 1252 aaPredicted RBP12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 SLC16A14Q7RTX9 510 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 Q96M66 194 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 PBDC1Q9BVG4 233 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 CHST5Q9GZS9 411 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 MAGT1Q9H0U3 335 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 NELFAQ9H3P2 528 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 PARPBPQ9NWS1 579 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 CLEC1BQ9P126 229 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 IGKV1-27A0A075B6S5 117 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 PHF1O43189 567 aaPredicted RBP12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 DHRS3O75911 302 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 SLC34A2O95436 690 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 TAGLN2P37802 199 aaKnown RBP12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 MTCP1P56278 107 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 RND3P61587 244 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 EWSR1Q01844 656 aaKnown RBP eCLIP12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 PIGYQ3MUY2 71 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 UNQ6494/PRO21346Q6UXR6 183 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 SLC35G3Q8N808 338 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 OR10D4PQ8NGN7 298 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 OR2G3Q8NGZ4 309 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 MSI2Q96DH6 328 aaKnown RBP12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 TP53RKQ96S44 253 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 DECR2Q9NUI1 292 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 FRYQ5TBA9 3013 aa12.12□□□□□ -0.47
SCNN1A-215ENST00000540037 TRBV11-1A0A0K0K1C0 115 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 RRP8O43159 456 aaKnown RBP12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 ATP6V0CP27449 155 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 CDX1P47902 265 aaPredicted RBP12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 ELOBQ15370 118 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 SPSB3Q6PJ21 355 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 SLC22A25Q6T423 547 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 Q6ZPA2 131 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 TMEM171Q8WVE6 324 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 ZNF837Q96EG3 531 aaPredicted RBP12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 SDHAF3Q9NRP4 125 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 RBFOX3A6NFN3 312 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 ZNF726A6NNF4 738 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 YKT6O15498 198 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 JMJD7P0C870 316 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 ALDH3B1P43353 468 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 CCR5P51681 352 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 RUNX1Q01196 453 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 P4HA3Q7Z4N8 544 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 MVB12AQ96EY5 273 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 GPR61Q9BZJ8 451 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 A0A1B0GX78 115 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 IGSF23A1L1A6 192 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 CXorf65A6NEN9 183 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 SHISA7A6NL88 538 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 ZNF724A8MTY0 619 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 GEMIN2O14893 280 aaKnown RBP12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 ST8SIA3O43173 380 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 GATCO43716 136 aaKnown RBP12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 SOD3P08294 240 aa12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 SUCLG1P53597 346 aaKnown RBP12.11□□□□□ -0.47
SCNN1A-215ENST00000540037 DLK1P80370 383 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms