RNA–Protein interactions for RNA: ENST00000461219.5

SCAF8-204, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-204ENST00000461219 SIRPDQ9H106 197 aa16.92■□□□□ 0.3
SCAF8-204ENST00000461219 CNOT2Q9NZN8 540 aaKnown RBP16.92■□□□□ 0.3
SCAF8-204ENST00000461219 ZNF222Q9UK12 451 aa16.92■□□□□ 0.3
SCAF8-204ENST00000461219 MAB21L2Q9Y586 359 aa16.92■□□□□ 0.3
SCAF8-204ENST00000461219 PCDHGB5Q9Y5G0 923 aa16.92■□□□□ 0.3
SCAF8-204ENST00000461219 TRBV23-1A0A0A0MS06 115 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 SPRY1O43609 319 aaPredicted RBP16.91■□□□□ 0.3
SCAF8-204ENST00000461219 XPNPEP2O43895 674 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 SOX2P48431 317 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 CDK5R1Q15078 307 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 RUSC1-AS1Q66K80 236 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 KIR3DL3Q8N743 410 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.91■□□□□ 0.3
SCAF8-204ENST00000461219 LY6G5BQ8NDX9 201 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 GPR148Q8TDV2 347 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 SPACA5Q96QH8 159 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 GPER1Q99527 375 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 HES4Q9HCC6 221 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 BABAM2Q9NXR7 383 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 MTCH1Q9NZJ7 389 aa16.91■□□□□ 0.3
SCAF8-204ENST00000461219 IGKV1-9A0A0C4DH69 117 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 SULT1B1O43704 296 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 CHRM2P08172 466 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 PIPP12273 146 aaPredicted RBP16.9■□□□□ 0.3
SCAF8-204ENST00000461219 MMP9P14780 707 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 RAB3AP20336 220 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 EEF1B2P24534 225 aaKnown RBP16.9■□□□□ 0.3
SCAF8-204ENST00000461219 AQP4P55087 323 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 SNU13P55769 128 aaKnown RBP16.9■□□□□ 0.3
SCAF8-204ENST00000461219 GUCA2AQ02747 115 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 SATL1Q86VE3 508 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 OR5D18Q8NGL1 313 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 OR52N1Q8NH53 320 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 C8orf46Q8TAG6 207 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 TFAP2CQ92754 450 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 DUX5Q96PT3 197 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 ZMAT3Q9HA38 289 aaKnown RBP16.9■□□□□ 0.3
SCAF8-204ENST00000461219 SIRT7Q9NRC8 400 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 SCN3BQ9NY72 215 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 CLEC2DQ9UHP7 191 aa16.9■□□□□ 0.3
SCAF8-204ENST00000461219 IGHV1-69DA0A0B4J2H0 117 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 CENPVL3A0A0U1RRI6 287 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 IGHV1-69P01742 117 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 TMEM225BP0DP42 221 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 PRKACAP17612 351 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 BCL3P20749 454 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 ERVK11-1P61568 191 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 RPL31P62899 125 aaKnown RBP16.89■□□□□ 0.29
SCAF8-204ENST00000461219 PPP3R1P63098 170 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 COL10A1Q03692 680 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 PDZK1IP1Q13113 114 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 C9orf139Q6ZV77 190 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 GDPD3Q7L5L3 318 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 FAM58AQ8N1B3 248 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 ZSCAN4Q8NAM6 433 aaPredicted RBP16.89■□□□□ 0.29
SCAF8-204ENST00000461219 TBC1D15Q8TC07 691 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 FAM216AQ8WUB2 273 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 GCDHQ92947 438 aaPredicted RBP16.89■□□□□ 0.29
SCAF8-204ENST00000461219 SLC25A28Q96A46 364 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 FAM96BQ9Y3D0 163 aa16.89■□□□□ 0.29
SCAF8-204ENST00000461219 hCG_1809904A0A1W2PP81 198 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 A0A1W2PPE2 198 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 A0A1W2PR64 198 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 A0A1W2PRV1 198 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 DNAJC9-AS1A6NH13 148 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 M0R1W7 72 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 MT-ND2P03891 347 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 TAS2R43P59537 309 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 UBA52P62987 128 aaKnown RBP16.88■□□□□ 0.29
SCAF8-204ENST00000461219 XAF1Q6GPH4 301 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 PARP16Q8N5Y8 322 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 OR4M1Q8NGD0 313 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 SMIM19Q96E16 107 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 FAM234AQ9H0X4 552 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 PLCXD1Q9NUJ7 323 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 RBFOX1Q9NWB1 397 aaKnown RBP16.88■□□□□ 0.29
SCAF8-204ENST00000461219 PSORS1C1Q9UIG5 152 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 ERGIC3Q9Y282 383 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 ZNF281Q9Y2X9 895 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 DSCAML1Q8TD84 2053 aa16.88■□□□□ 0.29
SCAF8-204ENST00000461219 PNMA8CA0A1B0GUJ8 204 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 F8VVB4 439 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 F8VWA3 439 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 H0YJX3 145 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 ANGPTL7O43827 346 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 HAND1O96004 215 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 TK1P04183 234 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 CALCBP10092 127 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 GABRR1P24046 479 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 EDDM3BP56851 147 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 DEFB112Q30KQ8 113 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 NCR3LG1Q68D85 454 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 C12orf54Q6X4T0 127 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 ZFP41Q8N8Y5 198 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 ZDHHC22Q8N966 263 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 OR5D13Q8NGL4 314 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 PPP1R35Q8TAP8 253 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 NRG4Q8WWG1 115 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 MYDGFQ969H8 173 aa16.87■□□□□ 0.29
SCAF8-204ENST00000461219 TMEM106AQ96A25 262 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms