RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 OR10R2Q8NGX6 335 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 NEUROG1Q92886 237 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 COX4I2Q96KJ9 171 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 GAL3ST1Q99999 423 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 LPAR5Q9H1C0 372 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 BANF2Q9H503 90 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 CBLN4Q9NTU7 201 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 RASL12Q9NYN1 266 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 MTCH1Q9NZJ7 389 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 GLS2Q9UI32 602 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 ST3GAL6Q9Y274 331 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 USP9XQ93008 2570 aaPredicted RBP11.6□□□□□ -0.55
VAPB-202ENST00000395802 IGKV1-12A0A0C4DH73 117 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 hCG_1807616A0A1W2PRN6 198 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 PYCARD-AS1I3L0S3 204 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 IFNL4K9M1U5 179 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 PLA2G10O15496 165 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 SSX4O60224 188 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 IGKV1D-12P01611 117 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 SFTPBP07988 381 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 PGA5P0DJD9 388 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 IRF2P14316 349 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 VEGFCP49767 419 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 PPOXP50336 477 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 WDR86Q86TI4 376 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 FAM58AQ8N1B3 248 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 OR10K1Q8NGX5 313 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 RAB3CQ96E17 227 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 Q96M66 194 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 SAP30LQ9HAJ7 183 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 SPACA1Q9HBV2 294 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 RALYQ9UKM9 306 aaKnown RBP11.6□□□□□ -0.55
VAPB-202ENST00000395802 hCG_2014768A0A024R1R8 64 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 CLEC18AA5D8T8 446 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 RAB27BO00194 218 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 SYNGR1O43759 233 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 LANCL1O43813 399 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 NXPH2O95156 264 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 COX6B1P14854 86 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 BCL3P20749 454 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 PTH2RP49190 550 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 TAS2R20P59543 309 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 DGCR2P98153 550 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 MPV17LQ2QL34 196 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 SPIN3Q5JUX0 258 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 CLEC18BQ6UXF7 455 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 GDPD3Q7L5L3 318 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 POC1AQ8NBT0 407 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 CLEC18CQ8NCF0 446 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 CHST4Q8NCG5 386 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 SMIM4Q8WVI0 70 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 EMG1Q92979 244 aaKnown RBP11.59□□□□□ -0.55
VAPB-202ENST00000395802 YIPF5Q969M3 257 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 NRIP2Q9BQI9 281 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 THAP7Q9BT49 309 aaPredicted RBP11.59□□□□□ -0.55
VAPB-202ENST00000395802 RAB1BQ9H0U4 201 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 C1orf123Q9NWV4 160 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 NPTNQ9Y639 398 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 ROS1P08922 2347 aa11.59□□□□□ -0.55
VAPB-202ENST00000395802 TRAV18A0A075B6X5 111 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 GSTZ1O43708 216 aaPredicted RBP11.58□□□□□ -0.56
VAPB-202ENST00000395802 GSTP1P09211 210 aaKnown RBP11.58□□□□□ -0.56
VAPB-202ENST00000395802 RFX2P48378 723 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 INPP1P49441 399 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 RBM11P57052 281 aaKnown RBP11.58□□□□□ -0.56
VAPB-202ENST00000395802 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.56
VAPB-202ENST00000395802 IL13RA2Q14627 380 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 MST1LQ2TV78 715 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 SMIM21Q3B7S5 101 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 HACD4Q5VWC8 232 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 PRAMEF6Q5VXH4 476 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 WDR82Q6UXN9 313 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 Q6ZTK2 550 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 FAM90A1Q86YD7 464 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 C1orf87Q8N0U7 546 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 C19orf18Q8NEA5 215 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 Q8TCH9 128 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 ITLN1Q8WWA0 313 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 NEDD4LQ96PU5 975 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 C11orf54Q9H0W9 315 aaPredicted RBP11.58□□□□□ -0.56
VAPB-202ENST00000395802 UFSP2Q9NUQ7 469 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 RBFOX1Q9NWB1 397 aaKnown RBP11.58□□□□□ -0.56
VAPB-202ENST00000395802 PPP1R3CQ9UQK1 317 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 ABCA4P78363 2273 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 ICE1Q9Y2F5 2266 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 A0A1W2PP11 408 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 SERPINE3A8MV23 424 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 SULT1C2O00338 296 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 RHBDL1O75783 438 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 RNF224P0DH78 156 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 SPNP16150 400 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 PRKACAP17612 351 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 GLRA1P23415 457 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 GABRR1P24046 479 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 BLVRBP30043 206 aaPredicted RBP11.58□□□□□ -0.56
VAPB-202ENST00000395802 NPBWR2P48146 333 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 ERVK11-1P61568 191 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 MPPED2Q15777 294 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 NRARPQ7Z6K4 114 aa11.58□□□□□ -0.56
VAPB-202ENST00000395802 C11orf53Q8IXP5 236 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms