RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 LIMK1P53667 647 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 PRSS53Q2L4Q9 553 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 CLRN3Q8NCR9 226 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 OR2I1PQ8NGU4 316 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 CABLES2Q9BTV7 478 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 PECRQ9BY49 303 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 ALX4Q9H161 411 aaPredicted RBP10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 PPP1R14DQ9NXH3 145 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 ZDBF2Q9HCK1 2354 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 TRIOBPQ9H2D6 2365 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 S100A8P05109 93 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 CCL4P13236 92 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 RAB4AP20338 218 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 CA6P23280 308 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 IGFBP7Q16270 282 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 TRAT1Q6PIZ9 186 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 SMIM15Q7Z3B0 74 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 HSD17B13Q7Z5P4 300 aaPredicted RBP10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 SOX7Q9BT81 388 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 C21orf140B9A014 251 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 TO15178 435 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 SPTBP11277 2137 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 GABRA1P14867 456 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 SELENOPP49908 381 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 GUK1Q16774 197 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 SFTPA2Q8IWL1 248 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 SCARF2Q96GP6 870 aaPredicted RBP10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 OSGIN2Q9Y236 505 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 GVINP1Q7Z2Y8 2422 aa10.48□□□□□ -0.73
DEPDC1-201ENST00000370966 C3orf85A0A1B0GTC6 90 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 ST8SIA5O15466 376 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 KRASP01116 189 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 CRHP06850 196 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 FAM209AQ5JX71 171 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 TMEM88Q6PEY1 159 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 OR2C3Q8N628 320 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 RPUSD4Q96CM3 377 aaKnown RBP10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 SAT2Q96F10 170 aaPredicted RBP10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 GLRX2Q9NS18 164 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 ZNF355PQ9NSJ1 428 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 PATE4P0C8F1 98 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 PDCD1Q15116 288 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 DGAT2L6Q6ZPD8 337 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 SLC25A42Q86VD7 318 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 SLC22A18ASQ8N1D0 253 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 CT55Q8WUE5 264 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 MFRPQ9BY79 579 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 ZNF331Q9NQX6 463 aaPredicted RBP10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 SOCS1O15524 211 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 IGF2P01344 180 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 RAB13P51153 203 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 NANOS3P60323 173 aaKnown RBP10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 UBE2G1P62253 170 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 HABP2Q14520 560 aaPredicted RBP10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 COL19A1Q14993 1142 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 C9orf62Q8N4C0 152 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 TVP23CQ96ET8 276 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 ZNF426Q9BUY5 554 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 WDR13Q9H1Z4 485 aa10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.47□□□□□ -0.73
DEPDC1-201ENST00000370966 NPBWR1P48145 328 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 H3F3AP84243 136 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 BATFQ16520 125 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 VASH2Q86V25 355 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 OR5M9Q8NGP3 310 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 CTHRC1Q96CG8 243 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 LURAP1Q96LR2 239 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 C12orf57Q99622 126 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 CLEC1BQ9P126 229 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 MYOFQ9NZM1 2061 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 TSPAN2O60636 221 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 ACTL6AO96019 429 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 VSIG8P0DPA2 414 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 CCL3P10147 92 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 DVL1P1P54792 670 aaPredicted RBP10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 TFF2Q03403 129 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 MIDNQ504T8 468 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 KDF1Q8NAX2 398 aaPredicted RBP10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 NMES1Q9C002 83 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 KCNK15Q9H427 330 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 NIT2Q9NQR4 276 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 TET1Q8NFU7 2136 aa10.46□□□□□ -0.73
DEPDC1-201ENST00000370966 OR5AC1P0C628 307 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 ZNF574Q6ZN55 896 aaPredicted RBP10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 OR10V1Q8NGI7 309 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 LIFP15018 202 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 ZNF17P17021 662 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 RPS4Y1P22090 263 aaKnown RBP10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 OR2B8PP59922 312 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 RPS16P62249 146 aaKnown RBP10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 ZNF816Q0VGE8 651 aaPredicted RBP10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 CEBPEQ15744 281 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 NCR3LG1Q68D85 454 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 LAIR2Q6ISS4 152 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 BTNL8Q6UX41 500 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 CLEC18BQ6UXF7 455 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 SLC36A1Q7Z2H8 476 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 ZNF439Q8NDP4 499 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 OR11H7Q8NGC8 314 aa10.46□□□□□ -0.74
DEPDC1-201ENST00000370966 CHST5Q9GZS9 411 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms