RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gm13723A0A1L1SUP2 315 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Enpp7D3Z6V6 446 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ighg2cF6TQW2 404 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm21834J3QN05 151 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Chek1O35280 476 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 P01864 335 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Klf16P58334 251 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Rab3cP62823 227 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Hormad2Q5SQP1 306 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1222Q7TR02 311 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr479Q7TRV1 327 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 P4htmQ8BG58 503 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Cyc1Q9D0M3 325 aaKnown RBP13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Samd8Q9DA37 478 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ssc4dA1L0T3 586 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ccdc9bA3KGF9 545 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tcl1aP56280 116 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 SrmQ64674 302 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 LipkQ8BM14 398 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 CtsoQ8BM88 312 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 C1sbQ8CFG8 688 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1151Q8VFQ8 308 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Mettl21AQ9CQL0 218 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Il36aQ9JLA2 160 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Trpm7Q923J1 1863 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Prl8a2O54832 240 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 P03976 113 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 CycsP62897 105 aaKnown RBP13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 McptlQ00356 246 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1495Q8VEZ4 319 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr998Q8VF76 314 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Rbm39Q8VH51 530 aaKnown RBP13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Lims1Q99JW4 325 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Mrpl24Q9CQ06 216 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 4933400A11RikQ9CR52 288 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Slc37a2Q9WU81 501 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Vmn1r82A0A087WRV1 305 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm9047B9EJX3 177 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm21818J3KMS6 170 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Fkbp2P45878 140 aaKnown RBP13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Plxna1P70206 1894 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Nufip2Q5F2E7 692 aaKnown RBP13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 St6gal2Q76K27 524 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1137Q7TR40 310 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Pcyt1bQ811Q9 369 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Fbxl2Q8BH16 423 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ear6Q923L7 155 aa13.99□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 P01629 112 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Csf2rb2P26954 878 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Cbr1P48758 277 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Timm8bP62077 83 aaKnown RBP13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Map2k6P70236 334 aaKnown RBP13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Cyb561a3Q6P1H1 242 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 BphlQ8R164 291 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 PccbQ99MN9 541 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Prl8a1Q9DAV8 240 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tmem38bQ9DAV9 292 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Rad1Q9QWZ1 280 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ighv1-78A0A0G2JGN3 117 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm11361A0A1Y7VKY1 152 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm15130F6PYN5 206 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 EndogO08600 294 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 AanatO88816 205 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 IfngP01580 155 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Itgb2P11835 771 aaKnown RBP13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Rab4aP56371 218 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ucp3P56501 308 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Rps18P62270 152 aaKnown RBP13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gpr143P70259 405 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Tppp2Q0P5Y3 170 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 MlanaQ2TA50 113 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr332Q5NC45 344 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Fstl4Q5STE3 841 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Traf4Q61382 470 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Spin2cQ6NVE3 257 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gm9881Q8BR56 211 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Pi15Q8BS03 258 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 CthQ8VCN5 398 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1054Q8VGS7 312 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Glyr1Q922P9 546 aaKnown RBP13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Fbxl6Q9QXW0 535 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ighv1-24A0A0A6YY24 117 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr1109A2AT96 312 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Esp16A8R0U9 85 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Cbr2P08074 244 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 RrasP10833 218 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Rab3dP35276 219 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Smn1P97801 288 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Ttyh2Q3TH73 532 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Hs3st3a1Q8BKN6 393 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Q8BN57 294 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Clec2hQ8C1T8 218 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 4930451G09RikQ8C5G4 195 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Vmn1r183Q8K3N5 305 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Chrnb4Q8R493 495 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr536Q8VFE9 307 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr472Q8VG43 310 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Olfr584Q8VGW0 319 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Mpped1Q91ZG2 326 aa13.98□□□□□ -0.17
Ccdc88b-201ENSMUST00000113440 Gstk1Q9DCM2 226 aa13.98□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms