RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 RPS4Y2Q8TD47 263 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 FEVQ99581 238 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 OCSTAMPQ9BR26 566 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 DGCR6LQ9BY27 220 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 PRSS22Q9GZN4 317 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 PBOV1Q9GZY1 135 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 ABCB10Q9NRK6 738 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 USE1Q9NZ43 259 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 IL36RNQ9UBH0 155 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 GTF2A1LQ9UNN4 478 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 BAIAP2Q9UQB8 552 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
SHKBP1-220ENST00000599716 LCE6AA0A183 80 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 TMEM269A0A1B0GVZ9 245 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 C17orf98A8MV24 154 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 VGLL3A8MV65 326 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 PRR23D1E9PI22 279 aaPredicted RBP6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 F2RL2O00254 374 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 SLC1A7O00341 560 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 MMP23AO75900 390 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 PF4P02776 101 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 LPLP06858 475 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 PRR23D2P0DMB1 279 aaPredicted RBP6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 ALOX5APP20292 161 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 PRDX6P30041 224 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 MAGEA2P43356 314 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 BLVRAP53004 296 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 ESRRGP62508 458 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 CD83Q01151 205 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 MS4A2Q01362 244 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 ODF4Q2M2E3 257 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 SMIM21Q3B7S5 101 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 ZNF626Q68DY1 528 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 OR2T5Q6IEZ7 315 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 LIAT1Q6ZQX7 453 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 C18orf65Q6ZTR6 163 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 BCDIN3DQ7Z5W3 292 aaKnown RBP6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 ZNF561Q8N587 486 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 PAPD5Q8NDF8 572 aaKnown RBP6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 WFDC9Q8NEX5 89 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 OR5A2Q8NGI9 324 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 OR2T29Q8NH02 315 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 ZNF671Q8TAW3 534 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 MYDGFQ969H8 173 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 CHST6Q9GZX3 395 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 REEP1Q9H902 201 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 ABCB9Q9NP78 766 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 INPP5EQ9NRR6 644 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 LAMP5Q9UJQ1 280 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 KIAA2026Q5HYC2 2103 aa6.92□□□□□ -1.3
SHKBP1-220ENST00000599716 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 TCRBV4S1A1TA0A5B7 111 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 TMEM82A0PJX8 343 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 OR5B21A6NL26 309 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 J3QT63 122 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 NRASP01111 189 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 IGHA1P01876 353 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 TTRP02766 147 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 IGHV1-8P0DP01 117 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 PRKACGP22612 351 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 DUSP1P28562 367 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 SNU13P55769 128 aaKnown RBP6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 ACTA2P62736 377 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 ACTG2P63267 376 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 ACTC1P68032 377 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 ACTA1P68133 377 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 RIPPLY1Q0D2K3 151 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 APOFQ13790 326 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 SNCBQ16143 134 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 ABCA11PQ4W5N1 156 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 KLHL22Q53GT1 634 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 UTF1Q5T230 341 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 ZNF684Q5T5D7 378 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 CENPVQ7Z7K6 275 aaPredicted RBP6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 NDNFQ8TB73 568 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 SLAMF9Q96A28 289 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 APOL4Q9BPW4 351 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 NRIP2Q9BQI9 281 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 TAGLN3Q9UI15 199 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 SLC22A13Q9Y226 551 aa6.91□□□□□ -1.3
SHKBP1-220ENST00000599716 IGKV1-27A0A075B6S5 117 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 A0A0U1RQV5 110 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 A0A1W2PPH5 198 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 FAM230AA0A1W2PPH8 454 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 PQLC2LA1A4F0 135 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 CCDC182A6NF36 153 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 K7N7A8 449 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 GSC2O15499 205 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 SNX3O60493 162 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 ZNF737O75373 536 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 IGLV3-1P01715 115 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 ZNF728P0DKX0 622 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 PAICSP22234 425 aaKnown RBP6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 SLC2A5P22732 501 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 GYS2P54840 703 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 OR12D2P58182 307 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 CD69Q07108 199 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 C9orf152Q5JTZ5 239 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 PRAMEF5Q5TYX0 476 aa6.9□□□□□ -1.3
SHKBP1-220ENST00000599716 LCN8Q6JVE9 175 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms