RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 NRIP2Q9BQI9 281 aa13.21□□□□□ -0.29
MBD3-206ENST00000589901 A0A1W2PPH5 198 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 PQLC2LA1A4F0 135 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 LOC110117498-PIK3R3F6TDL0 507 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 M0R129 80 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 NOS1APO75052 506 aaPredicted RBP13.2□□□□□ -0.3
MBD3-206ENST00000589901 NXPH2O95156 264 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 CLVS2Q5SYC1 327 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 TMEM42Q69YG0 159 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 ZNF782Q6ZMW2 699 aaPredicted RBP13.2□□□□□ -0.3
MBD3-206ENST00000589901 ASRGL1Q7L266 308 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 LHFPL4Q7Z7J7 247 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 GID4Q8IVV7 300 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 OR2T6Q8NHC8 308 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 CFHR4Q92496 578 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 CNN2Q99439 309 aaKnown RBP13.2□□□□□ -0.3
MBD3-206ENST00000589901 GABARAPL1Q9H0R8 117 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 RAB18Q9NP72 206 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 USE1Q9NZ43 259 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 OR14J1Q9UGF5 321 aa13.2□□□□□ -0.3
MBD3-206ENST00000589901 A0A1B0GTI1 187 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 OPN1MWP04001 364 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 TK1P04183 234 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 OPN1MW2P0DN77 364 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 OPN1MW3P0DN78 364 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 VSIG10L2P0DP72 767 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 PIPP12273 146 aaPredicted RBP13.19□□□□□ -0.3
MBD3-206ENST00000589901 LGALS4P56470 323 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 CXCR4P61073 352 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 BEAN1Q3B7T3 259 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 PLA1AQ53H76 456 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 BCL2L15Q5TBC7 163 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 C11orf88Q6PI97 169 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 ZNF322Q6U7Q0 402 aaPredicted RBP13.19□□□□□ -0.3
MBD3-206ENST00000589901 ANGPTL5Q86XS5 388 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 DYNAPQ8N1N2 210 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 OR14K1Q8NGZ2 314 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 MNTQ99583 582 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 NKX3-1Q99801 234 aaPredicted RBP13.19□□□□□ -0.3
MBD3-206ENST00000589901 NPFFR1Q9GZQ6 430 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 RANBP3Q9H6Z4 567 aaPredicted RBP13.19□□□□□ -0.3
MBD3-206ENST00000589901 HES4Q9HCC6 221 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 OR52A1Q9UKL2 312 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 V9GYS6 101 aa13.19□□□□□ -0.3
MBD3-206ENST00000589901 MEX3AA1L020 520 aaKnown RBP13.18□□□□□ -0.3
MBD3-206ENST00000589901 DLGAP1O14490 977 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 ATP6V1E1P36543 226 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 RAB13P51153 203 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 DLX6P56179 175 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 HABP2Q14520 560 aaPredicted RBP13.18□□□□□ -0.3
MBD3-206ENST00000589901 SLX4IPQ5VYV7 408 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 NXNL2Q5VZ03 156 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 KDM4DQ6B0I6 523 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 MEPCEQ7L2J0 689 aaKnown RBP13.18□□□□□ -0.3
MBD3-206ENST00000589901 CALHM1Q8IU99 346 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 SLC35F2Q8IXU6 374 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 ELMOD2Q8IZ81 293 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 LYG1Q8N1E2 194 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 TCEANCQ8N8B7 351 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 TMEM163Q8TC26 289 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 RIBC2Q9H4K1 309 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 ADGRL4Q9HBW9 690 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 OAZ3Q9UMX2 235 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 SLC22A13Q9Y226 551 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 POLDIP2Q9Y2S7 368 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 R4GMQ9 66 aa13.18□□□□□ -0.3
MBD3-206ENST00000589901 TET2Q6N021 2002 aaPredicted RBP13.18□□□□□ -0.3
MBD3-206ENST00000589901 hCG_1809904A0A1W2PP81 198 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 A0A1W2PPE2 198 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 A0A1W2PR64 198 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 A0A1W2PRV1 198 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 FAM90A8PA6NJQ4 464 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 ZAR1LA6NP61 321 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 C17orf98A8MV24 154 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 PRB2P02812 416 aaPredicted RBP13.17□□□□□ -0.3
MBD3-206ENST00000589901 MPZP25189 248 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 EPHA2P29317 976 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 CDC42P60953 191 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 ERVK11-1P61568 191 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 SAMD5Q5TGI4 173 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 AADACL4Q5VUY2 407 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 CCBE1Q6UXH8 406 aaPredicted RBP13.17□□□□□ -0.3
MBD3-206ENST00000589901 PYDC1Q8WXC3 89 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 RFKQ969G6 155 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 CIB1Q99828 191 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 MOB1AQ9H8S9 216 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 ZNF702PQ9H963 129 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 IMPAD1Q9NX62 359 aa13.17□□□□□ -0.3
MBD3-206ENST00000589901 MRM2Q9UI43 246 aaKnown RBP13.17□□□□□ -0.3
MBD3-206ENST00000589901 SAC3D1A6NKF1 404 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 VGLL3A8MV65 326 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 ZNF670-ZNF695F2Z2N8 137 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 F8VVB4 439 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 F8VWA3 439 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 H3BSH0 61 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 K7N7A8 449 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 MITFO75030 526 aaPredicted RBP13.16□□□□□ -0.3
MBD3-206ENST00000589901 EFNB1P98172 346 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 COL10A1Q03692 680 aa13.16□□□□□ -0.3
MBD3-206ENST00000589901 KPNB1Q14974 876 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms