RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 TSPAN11A1L157 253 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 SIGLEC16A6NMB1 481 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 KNCNA6PVL3 124 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 C17orf98A8MV24 154 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 J3QT63 122 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 UPK1AO00322 258 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 NDUFAB1O14561 156 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 LSM1O15116 133 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 HUS1O60921 280 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 DNAJB6O75190 326 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 CCNB2O95067 398 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 SMC2O95347 1197 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 IFNW1P05000 195 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 RHOCP08134 193 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 ZNF24P17028 368 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TNNI1P19237 187 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 GTF2E2P29084 291 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 PRSS3P35030 304 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 MAGEA3P43357 314 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 UQCRFS1P47985 274 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TUFMP49411 452 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 RPS15P62841 145 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 PAFAH1B2P68402 229 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 CTAG1AP78358 180 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 BEX3Q00994 111 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 ENDOGQ14249 297 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 FAM229BQ4G0N7 80 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 CCDC183Q5T5S1 534 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 C16orf87Q6PH81 154 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 CLEC18BQ6UXF7 455 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 WDR82Q6UXN9 313 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 RUFY3Q7L099 469 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 VTCN1Q7Z7D3 282 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 SCD5Q86SK9 330 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 UNC93AQ86WB7 457 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 HS3ST5Q8IZT8 346 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 VKORC1L1Q8N0U8 176 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 DAW1Q8N136 415 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 KIF2BQ8N4N8 673 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TRAM1L1Q8N609 369 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 NECAB1Q8N987 351 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 C8orf31Q8N9H6 132 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 WDR31Q8NA23 367 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TTC29Q8NA56 475 aaPredicted RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 CYB561A3Q8NBI2 242 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 OR4K2Q8NGD2 314 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 OR56B2PQ8NGI1 322 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 SPACA4Q8TDM5 124 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 BAALCQ8WXS3 180 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 SLC38A4Q969I6 547 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 APH1AQ96BI3 265 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 RASD2Q96D21 266 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 SMARCD1Q96GM5 515 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 PPP1R36Q96LQ0 422 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 SCGB3A2Q96PL1 93 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 XPO6Q96QU8 1125 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TGS1Q96RS0 853 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 NAPGQ99747 312 aaPredicted RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 BPIFA3Q9BQP9 254 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TMEM175Q9BSA9 504 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 C20orf24Q9BUV8 137 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 CHID1Q9BWS9 393 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 ZYG11BQ9C0D3 744 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 ZNF436Q9C0F3 470 aaPredicted RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 NT5C3AQ9H0P0 336 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 ARV1Q9H2C2 271 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 OR51B5Q9H339 312 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 C16orf95Q9H693 158 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TMEM185BQ9H7F4 350 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 GEMIN7Q9H840 131 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 REEP1Q9H902 201 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 LYRM4Q9HD34 91 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TREX1Q9NSU2 369 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 MYEF2Q9P2K5 600 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 EXTL2Q9UBQ6 330 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TBC1D24Q9ULP9 559 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TMCC3Q9ULS5 477 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 NDRG2Q9UN36 371 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 KLF12Q9Y4X4 402 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 BRWD1Q9NSI6 2320 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 CCDC88AQ3V6T2 1871 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 NAV1Q8NEY1 1877 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 PTPRSQ13332 1948 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 GREB1Q4ZG55 1949 aa0.05□□□□□ -2.4
FOXN3-216ENST00000557496 TNRC6AQ8NDV7 1962 aaKnown RBP0.05□□□□□ -2.4
FOXN3-216ENST00000557496 RGS12O14924 1447 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 PLCH2O75038 1416 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 CACNA1BQ00975 2339 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ADAMTSL1Q8N6G6 1762 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 SLIT2O94813 1529 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 NAV2Q8IVL1 2488 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 KCNE1BA0A087WTH5 132 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 TRAV8-6A0A0B4J262 113 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 IGKV1-12A0A0C4DH73 117 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 A0A0G2JMP0 313 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 A0A0X1KG70 313 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 LOC100653049A0A140TA62 436 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 A6NED7 52 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 SLC22A20A6NK97 555 aa0.04□□□□□ -2.4
FOXN3-216ENST00000557496 ODF3BA8MYP8 253 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms