RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 FUT5Q11128 374 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 SYT6Q5T7P8 510 aaPredicted RBP2.27□□□□□ -2.05
PRKDC-205ENST00000535375 RNF10Q8N5U6 811 aaKnown RBP2.27□□□□□ -2.05
PRKDC-205ENST00000535375 OR4M2Q8NGB6 313 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 ING5Q8WYH8 240 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 ADTRPQ96IZ2 230 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 SHCBP1LQ9BZQ2 653 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 ACOT13Q9NPJ3 140 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 CA10Q9NS85 328 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 SDHAF2Q9NX18 166 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 CYB5R1Q9UHQ9 305 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 NXT1Q9UKK6 140 aaKnown RBP2.27□□□□□ -2.05
PRKDC-205ENST00000535375 POFUT2Q9Y2G5 429 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 IGKV1-6A0A0C4DH72 117 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 TMEM72A0PK05 275 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 MGAT4DA6NG13 374 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 CENPBD1B2RD01 187 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 LHBP01229 141 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 CD9P21926 228 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 GUSBP1Q15486 140 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 CEACAM16Q2WEN9 425 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 MORN3Q6PF18 240 aaPredicted RBP2.26□□□□□ -2.05
PRKDC-205ENST00000535375 DEGS2Q6QHC5 323 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 CASP12Q6UXS9 341 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 NELFCDQ8IXH7 590 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 CDRT4Q8N9R6 151 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 OR5M1Q8NGP8 315 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 OR2Y1Q8NGV0 311 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 DOK4Q8TEW6 326 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 TMEM159Q96B96 161 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 TMED9Q9BVK6 235 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 WDR55Q9H6Y2 383 aaPredicted RBP2.26□□□□□ -2.05
PRKDC-205ENST00000535375 PLEKHA1Q9HB21 404 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 MAT2BQ9NZL9 334 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 DHCR7Q9UBM7 475 aaKnown RBP2.26□□□□□ -2.05
PRKDC-205ENST00000535375 TSPOAP1O95153 1857 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 DOCK8Q8NF50 2099 aa2.26□□□□□ -2.05
PRKDC-205ENST00000535375 NPHP4O75161 1426 aaPredicted RBP2.25□□□□□ -2.05
PRKDC-205ENST00000535375 IGHV3OR16-8A0A075B7F1 116 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 PLPP3O14495 311 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 IGKV1-39P01597 117 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 IGKV1D-39P04432 117 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 CASQ1P31415 396 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 TAS2R43P59537 309 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 PPP1CAP62136 330 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 RPS11P62280 158 aaKnown RBP eCLIP2.25□□□□□ -2.05
PRKDC-205ENST00000535375 GRB2P62993 217 aaKnown RBP2.25□□□□□ -2.05
PRKDC-205ENST00000535375 IL5RAQ01344 420 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 GPR176Q14439 515 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 SP6Q3SY56 376 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 TMEM25Q86YD3 366 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 BBS7Q8IWZ6 715 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 ORMDL3Q8N138 153 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 C1orf64Q8NEQ6 169 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 OR4K2Q8NGD2 314 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 OR4D6Q8NGJ1 314 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 OR52N1Q8NH53 320 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 TMEM239Q8WW34 195 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 RILPQ96NA2 401 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 CIB1Q99828 191 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 OR52A5Q9H2C5 316 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 SLC38A1Q9H2H9 487 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 C12orf4Q9NQ89 552 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 MRM2Q9UI43 246 aaKnown RBP2.25□□□□□ -2.05
PRKDC-205ENST00000535375 ANXA10Q9UJ72 324 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 RAB23Q9ULC3 237 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 ORC6Q9Y5N6 252 aa2.25□□□□□ -2.05
PRKDC-205ENST00000535375 A0A1B0GW15 77 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 ERICH4A6NGS2 130 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 BTNL10A8MVZ5 291 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 HSBP1L1C9JCN9 74 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 F8VP50 259 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 hCG_2039718K7EN88 272 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 BRI3O95415 125 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 NPPAP01160 153 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 RPN2P04844 631 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 NTF3P20783 257 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 PSMB2P49721 201 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 LAMTOR4Q0VGL1 99 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 IDNKQ5T6J7 187 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 RESP18Q5W5W9 173 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 THOC7Q6I9Y2 204 aaKnown RBP2.24□□□□□ -2.05
PRKDC-205ENST00000535375 CLEC19AQ6UXS0 136 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 Q6ZT83 130 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 NT5DC3Q86UY8 548 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 SPICQ8N5J4 248 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 ATPAF2Q8N5M1 289 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 ZNF680Q8NEM1 530 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 OR2Z1Q8NG97 314 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 OR51Q1Q8NH59 317 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 TNFRSF14Q92956 283 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 HGDQ93099 445 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 ZNF75AQ96N20 296 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 IP6K3Q96PC2 410 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 ACBD6Q9BR61 282 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 SND1-IT1Q9HBX3 110 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 TAS2R5Q9NYW4 299 aa2.24□□□□□ -2.05
PRKDC-205ENST00000535375 PRO0628Q9UI54 55 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms