RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 LIN7BQ9HAP6 207 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 IL1RAPQ9NPH3 570 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 BAIAP2Q9UQB8 552 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 SLC22A13Q9Y226 551 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 PIGLQ9Y2B2 252 aa16.16■□□□□ 0.18
SQSTM1-215ENST00000514093 IGHV2-26A0A0B4J1V2 119 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 RBP4P02753 201 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 AMY1AP04745 511 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 AMY2AP04746 511 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 RIPPLY1Q0D2K3 151 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 KLHL22Q53GT1 634 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 C8orf86Q6ZUL3 223 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 GDPD3Q7L5L3 318 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 C16orf82Q7Z2V1 217 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 PIGWQ7Z7B1 504 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 ZNF329Q86UD4 541 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 OR51D1Q8NGF3 324 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 AKR1E2Q96JD6 320 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 SPAG4Q9NPE6 437 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 CMC2Q9NRP2 79 aa16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 LSM4Q9Y4Z0 139 aaKnown RBP16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 HUWE1Q7Z6Z7 4374 aaKnown RBP16.15■□□□□ 0.18
SQSTM1-215ENST00000514093 STAB2Q8WWQ8 2551 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 J3QT63 122 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 PSMD9O00233 223 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 GSC2O15499 205 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 NOS1APO75052 506 aaPredicted RBP16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 NRASP01111 189 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 HTR1DP28221 377 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 HMGA2P52926 109 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 ZNF684Q5T5D7 378 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 TRPM8Q7Z2W7 1104 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 IQCF1Q8N6M8 205 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 TPRX1Q8N7U7 411 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 OR51E1Q8TCB6 317 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 PRR25Q96S07 402 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 HES4Q9HCC6 221 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 GPR84Q9NQS5 396 aa16.14■□□□□ 0.17
SQSTM1-215ENST00000514093 PSMB11A5LHX3 300 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 MMP23AO75900 390 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 KRT36O76013 467 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 CCNB2O95067 398 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 HCCSP53701 268 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 RPL23AP62750 156 aaKnown RBP16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 EDDM3AQ14507 147 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 ASRGL1Q7L266 308 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 KRT77Q7Z794 578 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 ZNF573Q86YE8 665 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 OSR2Q8N2R0 312 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 OR4P4Q8NGL7 312 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 NSMCE2Q96MF7 247 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 DUX3Q96PT4 197 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 CLEC7AQ9BXN2 247 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 TMEM133Q9H2Q1 129 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 GPR173Q9NS66 373 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 VNN3Q9NY84 501 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 SESN1Q9Y6P5 492 aa16.13■□□□□ 0.17
SQSTM1-215ENST00000514093 A0A0U1RQV5 110 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 ZNF737O75373 536 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 H2AFXP16104 143 aaPredicted RBP16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 IL18R1Q13478 541 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 BAIAP2L2Q6UXY1 529 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 ANGPTL5Q86XS5 388 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 ZNF454Q8N9F8 522 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 MUC7Q8TAX7 377 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 RBM14Q96PK6 669 aaKnown RBP16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 TEAD3Q99594 435 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 FAM206AQ9NX38 181 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 MAGEL2Q9UJ55 1249 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 ENPP5Q9UJA9 477 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 POLDIP2Q9Y2S7 368 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 DNAH7Q8WXX0 4024 aa16.12■□□□□ 0.17
SQSTM1-215ENST00000514093 TMEM269A0A1B0GVZ9 245 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 NUDT19A8MXV4 375 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 F8VVB4 439 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 F8VWA3 439 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 DNAJC8O75937 253 aaPredicted RBP16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 OR2F2O95006 317 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 INMTO95050 263 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 ZFPL1O95159 310 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 BRS3P32247 399 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 CBX1P83916 185 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 OR2W3Q7Z3T1 314 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 PBOV1Q9GZY1 135 aa16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 ZMAT5Q9UDW3 170 aaKnown RBP16.11■□□□□ 0.17
SQSTM1-215ENST00000514093 DSCAML1Q8TD84 2053 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 TMEM82A0PJX8 343 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 PQLC2LA1A4F0 135 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 A6NIN4 97 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 ARPC2O15144 300 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 CCDC22O60826 627 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 SNRNP70P08621 437 aaKnown RBP16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 MYCNOSP40205 109 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 RAB25P57735 213 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 ERVK11-1P61568 191 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 PLBD1Q6P4A8 553 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 OR8H2Q8N162 312 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 KLHL30-AS1Q8NEE0 82 aa16.1■□□□□ 0.17
SQSTM1-215ENST00000514093 P2RX4Q99571 388 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms