RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 MRGPRX4Q96LA9 322 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 CLUHP3Q96NS8 147 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 TSPAN32Q96QS1 320 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 NAGKQ9UJ70 344 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 DMDP11532 3685 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 BORCS7-ASMTA0A0B4J1R7 106 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 C2orf72A6NCS6 295 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 CEBPZOSA8MTT3 80 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 SYT7O43581 403 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 SMPD2O60906 423 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 DEDDO75618 318 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 GUSBP08236 651 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 GCH1P30793 250 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 TMEM50BP56557 158 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 EIF5AP63241 154 aaKnown RBP6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 SGCGQ13326 291 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 SLC17A1Q14916 467 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 MLF2Q15773 248 aaPredicted RBP6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 HIKESHIQ53FT3 197 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 FAM57BQ71RH2 274 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 C16orf82Q7Z2V1 217 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 C1QL2Q7Z5L3 287 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 SFTPA2Q8IWL1 248 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF283Q8N7M2 679 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 OIT3Q8WWZ8 545 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 FAM71F1Q96KD3 344 aaPredicted RBP6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 RBM24Q9BX46 236 aaKnown RBP6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 FAM60AQ9NP50 221 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 RAB18Q9NP72 206 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 HCFC1R1Q9NWW0 138 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 WNT16Q9UBV4 365 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 LRP12Q9Y561 859 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 SDK2Q58EX2 2172 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 VWA8A3KMH1 1905 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 PCNX3Q9H6A9 2034 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 PGPEP1LA6NFU8 196 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF264O43296 627 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 NDUFB8O95169 186 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 CSTAP01040 98 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 ASGR1P07306 291 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 OR5AC1P0C628 307 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 PAX1P15863 534 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 SELPP16109 830 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 GABRR1P24046 479 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 FAM3AP98173 230 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 PRDX1Q06830 199 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 FBXW9Q5XUX1 488 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 KCTD18Q6PI47 426 aaPredicted RBP6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 CDC20BQ86Y33 519 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF573Q86YE8 665 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF595Q8IYB9 648 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 GBGT1Q8N5D6 347 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 ZDHHC22Q8N966 263 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 GATAD1Q8WUU5 269 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 TMEM171Q8WVE6 324 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 CIB3Q96Q77 187 aaPredicted RBP6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 OR6C1Q96RD1 312 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 ABHD6Q9BV23 337 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 COA3Q9Y2R0 106 aaPredicted RBP6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 WNT6Q9Y6F9 365 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 F2Z2F3 143 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 CLDN34H7C241 214 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 HLA-DOBP13765 273 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 CTLA4P16410 223 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 REEP5Q00765 189 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 TLE4Q04727 773 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 RAB35Q15286 201 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 DEFB110Q30KQ9 67 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 EIPR1Q53HC9 387 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 SLC25A24Q6NUK1 477 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 DPY19L2P2Q6ZN68 376 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 C6orf201Q7Z4U5 140 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 FAM160A2Q8N612 972 aaPredicted RBP6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 ACTR3CQ9C0K3 210 aaPredicted RBP6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 WNT10AQ9GZT5 417 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 LIME1Q9H400 295 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 DNAJB12Q9NXW2 375 aaKnown RBP6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 SAGE1Q9NXZ1 904 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 YIPF1Q9Y548 306 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 TET1Q8NFU7 2136 aa6.38□□□□□ -1.39
LIMCH1-207ENST00000508466 A0A1W2PQ45 241 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 A0A1W2PQY0 241 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 SSSCA1O60232 199 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 FRMD6-AS1P0C7T7 363 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF92Q03936 586 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF154Q13106 437 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 IQCJQ1A5X6 159 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 CHRFAM7AQ494W8 412 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 LY6G5CQ5SRR4 150 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 LDLRAD2Q5SZI1 272 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 LEMD1Q68G75 181 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 FAM166AQ6J272 317 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 FBXW12Q6X9E4 464 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 OR5C1Q8NGR4 320 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 PGAM5Q96HS1 289 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 BTF3L4Q96K17 158 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 CCNL2Q96S94 520 aaPredicted RBP6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 NUDT22Q9BRQ3 303 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 TMEM204Q9BSN7 226 aa6.37□□□□□ -1.39
LIMCH1-207ENST00000508466 ALKBH7Q9BT30 221 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms