RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 REV3LO60673 3130 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 IGHV3-64DA0A0J9YX35 117 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 NDUFS6O75380 124 aaKnown RBP11.17□□□□□ -0.62
VPS52-218ENST00000482399 NKX6-1P78426 367 aaPredicted RBP11.17□□□□□ -0.62
VPS52-218ENST00000482399 AKR1C8PQ5T2L2 129 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 GNRHR2Q96P88 292 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 ALKBH4Q9NXW9 302 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 ZNF107Q9UII5 783 aaPredicted RBP11.17□□□□□ -0.62
VPS52-218ENST00000482399 SRPK3Q9UPE1 567 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 LIPT2A6NK58 231 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 E5RGE8 158 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 CYB5BO43169 146 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 TRAPPC6AO75865 159 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 HLA-HP01893 362 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 MBPP02686 304 aaPredicted RBP11.16□□□□□ -0.62
VPS52-218ENST00000482399 ACKR3P25106 362 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 EIF2S3P41091 472 aaKnown RBP11.16□□□□□ -0.62
VPS52-218ENST00000482399 SLC35A1P78382 337 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 AADACL3Q5VUY0 350 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 FBXL14Q8N1E6 418 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 ARHGEF39Q8N4T4 335 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 NOXO1Q8NFA2 376 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 OR52M1Q8NGK5 317 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 HAS2Q92819 552 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 PTX4Q96A99 478 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 RHOVQ96L33 236 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 OR6C1Q96RD1 312 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 NSG2Q9Y328 171 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 LIPGQ9Y5X9 500 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 PQLC2LA1A4F0 135 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 FIGNL2A6NMB9 653 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 CLN5O75503 358 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 RAB11AP62491 216 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 CTAG1AP78358 180 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 RUNX1Q01196 453 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 C21orf62-AS1Q17RA5 79 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 PIGYQ3MUY2 71 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 UBALD1Q8TB05 177 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 IL1F10Q8WWZ1 152 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 SYT3Q9BQG1 590 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 TCEAL7Q9BRU2 100 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 ABHD14AQ9BUJ0 271 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 DNAJB11Q9UBS4 358 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 CACFD1Q9UGQ2 172 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 PCDH15Q96QU1 1955 aa11.16□□□□□ -0.62
VPS52-218ENST00000482399 IGKV1-9A0A0C4DH69 117 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 A0A1W2PR80 420 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 ZNF814B7Z6K7 855 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 AP4M1O00189 453 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 SMIM6P0DI80 62 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 HLA-GP17693 338 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 ZNF84P51523 738 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 UBE2V2Q15819 145 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 VAX1Q5SQQ9 334 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 METTL9Q9H1A3 318 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 SLC35B3Q9H1N7 401 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 KIAA2026Q5HYC2 2103 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 ICE1Q9Y2F5 2266 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 TRIOBPQ9H2D6 2365 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 HSPA12AO43301 675 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 CNOT4O95628 575 aaKnown RBP11.15□□□□□ -0.62
VPS52-218ENST00000482399 H2AFB1P0C5Y9 115 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 EFNA3P52797 238 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 MRPS34P82930 218 aaKnown RBP11.15□□□□□ -0.62
VPS52-218ENST00000482399 C5orf46Q6UWT4 87 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 LCN15Q6UWW0 184 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 C5orf24Q7Z6I8 188 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 ST8SIA1Q92185 356 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 SMIM8Q96KF7 97 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 PARP11Q9NR21 331 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 GNG13Q9P2W3 67 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 DENND4AQ7Z401 1863 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 NSG1A0A0A6YYJ2 146 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 ANKUB1A6NFN9 424 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 H0YL77 283 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 NPIPB7O75200 414 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 RAB5CP51148 216 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 RNF212Q495C1 297 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 NKAIN1Q4KMZ8 207 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 GPR137CQ8N3F9 429 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 NECAP1Q8NC96 275 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 UCN2Q96RP3 112 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 IER2Q9BTL4 223 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 PAPOLGQ9BWT3 736 aaKnown RBP11.15□□□□□ -0.62
VPS52-218ENST00000482399 LMAN1LQ9HAT1 526 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 ANXA10Q9UJ72 324 aa11.15□□□□□ -0.62
VPS52-218ENST00000482399 FTCDNL1E5RQL4 147 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 C5orf67F2Z3F1 127 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 HSD17B6O14756 317 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 GEMIN2O14893 280 aaKnown RBP11.14□□□□□ -0.63
VPS52-218ENST00000482399 RPL23AP62750 156 aaKnown RBP11.14□□□□□ -0.63
VPS52-218ENST00000482399 S100A12P80511 92 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 ECH1Q13011 328 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 ALKBH3Q96Q83 286 aaPredicted RBP11.14□□□□□ -0.63
VPS52-218ENST00000482399 TMEM100Q9NV29 134 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 NECAP2Q9NVZ3 263 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 NCOA6Q14686 2063 aaPredicted RBP11.14□□□□□ -0.63
VPS52-218ENST00000482399 ZNF705GA8MUZ8 300 aaPredicted RBP11.14□□□□□ -0.63
VPS52-218ENST00000482399 HTR5AP47898 357 aa11.14□□□□□ -0.63
VPS52-218ENST00000482399 PNLIPRP3Q17RR3 467 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms