RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 FAM19A5Q7Z5A7 132 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 NAA40Q86UY6 237 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 C11orf42Q8N5U0 333 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 RCN3Q96D15 328 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 ST6GAL2Q96JF0 529 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 LINC00052Q96N35 136 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 LINC00470Q9BZP3 86 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 NKX6-2Q9C056 277 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 MED29Q9NX70 200 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 RAB22AQ9UL26 194 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 LAMP3Q9UQV4 416 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 RCL1Q9Y2P8 373 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 ICE1Q9Y2F5 2266 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 LAMA5O15230 3695 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 TRAV39A0A0B4J263 110 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 CIB4A0PJX0 185 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 OR5H1A6NKK0 313 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 TMEM200CA6NKL6 621 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 E5RGE8 158 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 NPIPB9F8W1W9 429 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 FFAR3O14843 346 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 GPR42O15529 346 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 OR7C2O60412 319 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 HTR1DP28221 377 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 SGSHP51688 502 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 GNMTQ14749 295 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 RABL3Q5HYI8 236 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 DMRTC1Q5HYR2 192 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 LDLRAD2Q5SZI1 272 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 TSEN54Q7Z6J9 526 aaKnown RBP5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 GJC3Q8NFK1 279 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 OR5M9Q8NGP3 310 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 P2RY11Q96G91 374 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNF649Q9BS31 505 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 LXNQ9BS40 222 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 FAAP24Q9BTP7 215 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 EFCAB11Q9BUY7 163 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 VN1R3Q9BXE9 311 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 TMEM126AQ9H061 195 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 MEGF9Q9H1U4 602 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 CDCP1Q9H5V8 836 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 SLC52A3Q9NQ40 469 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 HINT3Q9NQE9 182 aaKnown RBP5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 SAR1AQ9NR31 198 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 PLSCR3Q9NRY6 295 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 ELOVL5Q9NYP7 299 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 PACSIN3Q9UKS6 424 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 HIVEP1P15822 2718 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 MYH7P12883 1935 aa5.25□□□□□ -1.57
SMARCE1-208ENST00000474246 A0A087WX48 190 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 TRAV24A0A0B4J272 114 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 HMGB3O15347 200 aaKnown RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 TAPBPO15533 448 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 SYNGR1O43759 233 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 GALR3O60755 368 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 RDH16O75452 317 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 GRAP2O75791 330 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 OR7C1O76099 320 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 CBX7O95931 251 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 HPNP05981 417 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 LINC00271P0C7V0 271 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 PGCP20142 388 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 PYCR1P32322 319 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 GZMKP49863 264 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 CLDN15P56746 228 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 CDK6Q00534 326 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 PSG4Q00888 419 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 HTR4Q13639 388 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 TRIP6Q15654 476 aaKnown RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNF672Q499Z4 452 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM102AQ5T9C2 384 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 OPN5Q6U736 354 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 WDR82Q6UXN9 313 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 ARPINQ7Z6K5 226 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 CLNKQ7Z7G1 428 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNF444Q8N0Y2 327 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 TSTD1Q8NFU3 115 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 OR9I1Q8NGQ6 314 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 OR4X1Q8NH49 305 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 OR14A16Q8NHC5 309 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 SHKBP1Q8TBC3 707 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 TMEM170AQ8WVE7 144 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 APOBEC3DQ96AK3 386 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 RSPRY1Q96DX4 576 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 GPR82Q96P67 336 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 OR51J1Q9H342 316 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM49BQ9NUQ9 324 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 FAM206AQ9NX38 181 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 FBXL2Q9UKC9 423 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 SNX10Q9Y5X0 201 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 SPTBN1Q01082 2364 aaKnown RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 CACNA1EQ15878 2313 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 MUC22E2RYF6 1773 aaPredicted RBP5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 TRAV18A0A075B6X5 111 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 A0A1B0GW55 424 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 CASTOR2A6NHX0 329 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 G3V4G9 280 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 K7ERI5 159 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 PIAS1O75925 651 aa5.24□□□□□ -1.57
SMARCE1-208ENST00000474246 STK17BO94768 372 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms