RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 MT-ND2P03891 347 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 PPIAL4GP0DN37 164 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 PRKACBP22694 351 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 RBP2P50120 134 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 ATP1B3P54709 279 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 IL13RA1P78552 427 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 IKZF1Q13422 519 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 DOC2BQ14184 412 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 DGUOKQ16854 277 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 SMIM21Q3B7S5 101 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 DMKNQ6E0U4 476 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-206ENST00000462306 CRIP3Q6Q6R5 217 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 STX19Q8N4C7 294 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 OR13C9Q8NGT0 318 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 ST8SIA4Q92187 359 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 SPSB1Q96BD6 273 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 SDSLQ96GA7 329 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 MED30Q96HR3 178 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 ZCCHC4Q9H5U6 513 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 DHDHQ9UQ10 334 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 MAB21L2Q9Y586 359 aa13.12□□□□□ -0.31
ERCC3-206ENST00000462306 F8VVB4 439 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 F8VWA3 439 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 GPR37O15354 613 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 ALX3O95076 343 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 NXPH2O95156 264 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 PLATP00750 562 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 CDK1P06493 297 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 LIPFP07098 398 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 EPHA1P21709 976 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 GABRA2P47869 451 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 MTCP1P56278 107 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 LRRC10Q5BKY1 277 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 ASPHD2Q6ICH7 369 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 SLC25A26Q70HW3 274 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 RNF144BQ7Z419 303 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 SERPINA12Q8IW75 414 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 BATF2Q8N1L9 274 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 CD177Q8N6Q3 437 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 NANOGP1Q8N7R0 232 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 LY6G5BQ8NDX9 201 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 GPR148Q8TDV2 347 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 TSEN15Q8WW01 171 aaKnown RBP13.11□□□□□ -0.31
ERCC3-206ENST00000462306 SLAMF9Q96A28 289 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 UPRTQ96BW1 309 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 SMIM19Q96E16 107 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 CEP19Q96LK0 163 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 OPALINQ96PE5 141 aa13.11□□□□□ -0.31
ERCC3-206ENST00000462306 PAK1IP1Q9NWT1 392 aaPredicted RBP13.11□□□□□ -0.31
ERCC3-206ENST00000462306 RPUSD1Q9UJJ7 312 aaKnown RBP13.11□□□□□ -0.31
ERCC3-206ENST00000462306 RFPL4AA6NLU0 287 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 PTGES3LE9PB15 166 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 RFPL4AL1F8VTS6 287 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 PRDX2P32119 198 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 HSPA13P48723 471 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 CAV3P56539 151 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 FGF12P61328 243 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 ARMCX4Q5H9R4 360 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 RNLSQ5VYX0 342 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 ZNF529Q6P280 563 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 ZFP41Q8N8Y5 198 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 PNLDC1Q8NA58 520 aaKnown RBP13.1□□□□□ -0.31
ERCC3-206ENST00000462306 ZNRF1Q8ND25 227 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 OR5D14Q8NGL3 314 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 SGCDQ92629 289 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 GHSRQ92847 366 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 DCTN5Q9BTE1 182 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 SLC25A10Q9UBX3 287 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-206ENST00000462306 ZNF281Q9Y2X9 895 aa13.1□□□□□ -0.31
ERCC3-206ENST00000462306 FBN1P35555 2871 aaKnown RBP13.1□□□□□ -0.31
ERCC3-206ENST00000462306 MYL12BO14950 172 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 SULT1B1O43704 296 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 MMP9P14780 707 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 SOX2P48431 317 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 POU3F4P49335 361 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 CEBPDP49716 269 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-206ENST00000462306 WNT4P56705 351 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 SLC35A2P78381 396 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 PDZK1IP1Q13113 114 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 SCGB2A2Q13296 93 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 TUSC1Q2TAM9 212 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 OR13C5Q8NGS8 318 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 C8orf46Q8TAG6 207 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 PGLYRP3Q96LB9 341 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 SPACA5Q96QH8 159 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 MDFIQ99750 246 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 CDCA4Q9BXL8 241 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 CNTD2Q9H8S5 307 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 SCN3BQ9NY72 215 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 NUP50Q9UKX7 468 aa13.09□□□□□ -0.31
ERCC3-206ENST00000462306 IGKV1-12A0A0C4DH73 117 aa13.08□□□□□ -0.32
ERCC3-206ENST00000462306 TRBV5-5A0A0J9YX44 114 aa13.08□□□□□ -0.32
ERCC3-206ENST00000462306 SPRY1O43609 319 aaPredicted RBP13.08□□□□□ -0.32
ERCC3-206ENST00000462306 INMTO95050 263 aa13.08□□□□□ -0.32
ERCC3-206ENST00000462306 KNG1P01042 644 aa13.08□□□□□ -0.32
ERCC3-206ENST00000462306 IGKV1D-12P01611 117 aa13.08□□□□□ -0.32
ERCC3-206ENST00000462306 SFTPBP07988 381 aa13.08□□□□□ -0.32
ERCC3-206ENST00000462306 IGHV4-38-2P0DP08 117 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 370.9 ms