RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 RER1O15258 196 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 SOCS1O15524 211 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 RAD51DO75771 328 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 MT-CO3P00414 261 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 HLA-AP01891 365 aaKnown RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 PMP2P02689 132 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 SLC2A1P11166 492 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 FGF5P12034 268 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 PRF1P14222 555 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 FKBP2P26885 142 aaKnown RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 NUP62P37198 522 aaPredicted RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 EIF1P41567 113 aaKnown RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 OR3A4PP47883 348 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 CXCL12P48061 93 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 ATP1B3P54709 279 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 TMEM50BP56557 158 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 GRB2P62993 217 aaKnown RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 SLC35A1P78382 337 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 TAF13Q15543 124 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 PNLIPRP3Q17RR3 467 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 TMEM176BQ3YBM2 270 aaPredicted RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 VAX1Q5SQQ9 334 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 C10orf128Q5T292 105 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 AWAT2Q6E213 333 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 LIN54Q6MZP7 749 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 TMEM81Q6P7N7 255 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 Q6ZSR3 168 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 ACOT7LQ6ZUV0 252 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 MOB3CQ70IA8 216 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 NAA40Q86UY6 237 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 GTPBP8Q8N3Z3 284 aaPredicted RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 TMEM104Q8NE00 496 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 SAP25Q8TEE9 199 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 MRPS24Q96EL2 167 aaKnown RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 SEC22AQ96IW7 307 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 RITA1Q96K30 269 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 FAM71F1Q96KD3 344 aaPredicted RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 LYZL4Q96KX0 146 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 SPACA5Q96QH8 159 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 DEFB126Q9BYW3 111 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 PPA2Q9H2U2 334 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 AKIRIN1Q9H9L7 192 aaPredicted RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 OCIAD1Q9NX40 245 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 GAR1Q9NY12 217 aaKnown RBP5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 POLR1DQ9Y2S0 133 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 SESN1Q9Y6P5 492 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 NCKAP5O14513 1909 aa5.86□□□□□ -1.47
CSNK2A1-204ENST00000400227 A0A0B4J2A0 478 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 KANTRA0A1W2PQU2 76 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 ZNF726A6NNF4 738 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 FOXI3A8MTJ6 420 aaPredicted RBP5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 MFNGO00587 321 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 TP53I11O14683 189 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 BET1O15155 118 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 SMAD9O15198 467 aaKnown RBP5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 DUS4LO95620 317 aaKnown RBP5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 CELA2AP08217 269 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 HIST1H1DP16402 221 aaKnown RBP5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 ZNF43P17038 809 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 AVPR2P30518 371 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 SFTPDP35247 375 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 THBS4P35443 961 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 DLSTP36957 453 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 ALDH3B1P43353 468 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 CLDN17P56750 224 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 TAS2R31P59538 309 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 LSM6P62312 80 aaKnown RBP5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 HIST1H3AP68431 136 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 H3F3AP84243 136 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 ENDOGQ14249 297 aaKnown RBP5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 MICBQ29980 383 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 SMUG1Q53HV7 270 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 ACTBL2Q562R1 376 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 PHYHD1Q5SRE7 291 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 HIST2H3PS2Q5TEC6 136 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 TFAP2EQ6VUC0 442 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 TMPPEQ6ZT21 453 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 HIST2H3AQ71DI3 136 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 FAM57BQ71RH2 274 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 ABHD12BQ7Z5M8 362 aaPredicted RBP5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 ZNF101Q8IZC7 436 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 STPG2Q8N412 459 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 FAM89BQ8N5H3 189 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 PNLDC1Q8NA58 520 aaKnown RBP5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 SPERTQ8NA61 448 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 RELL2Q8NC24 303 aaPredicted RBP5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 TMEM185AQ8NFB2 350 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 PXT1Q8NFP0 134 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 OR4K15Q8NH41 348 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 KCNG3Q8TAE7 436 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 PPP1R1CQ8WVI7 109 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 TMEM230Q96A57 120 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 CYYR1Q96J86 154 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 PHB2Q99623 299 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 ZNF416Q9BWM5 594 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 BANF2Q9H503 90 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 GAREM1Q9H706 876 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 WDR54Q9H977 334 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 PROK2Q9HC23 129 aa5.85□□□□□ -1.47
CSNK2A1-204ENST00000400227 SH2D2AQ9NP31 389 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms