RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 GRPP07492 148 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 MGMTP16455 207 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 ZNF154Q13106 437 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 TRIM16LQ309B1 348 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 TMEM255AQ5JRV8 349 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 ELP2Q6IA86 826 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 CRIP3Q6Q6R5 217 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 FIP1L1Q6UN15 594 aaKnown RBP11.63□□□□□ -0.55
VAPB-202ENST00000395802 POC5Q8NA72 575 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 MINDY2Q8NBR6 621 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 SCCPDHQ8NBX0 429 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 ACBD4Q8NC06 268 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 ABHD1Q96SE0 405 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 TLNRD1Q9H1K6 362 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 MYEF2Q9P2K5 600 aaKnown RBP11.63□□□□□ -0.55
VAPB-202ENST00000395802 ZSCAN5BA6NJL1 495 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 A6NLC8 198 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 A6NNC1 897 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 H0YL77 283 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 TPD52L2O43399 206 aaKnown RBP11.63□□□□□ -0.55
VAPB-202ENST00000395802 AKR7A2O43488 359 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 ANGPTL7O43827 346 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 HTR3BO95264 441 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 PTTG1O95997 202 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 PLA2G2AP14555 144 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 LOXP28300 417 aaPredicted RBP11.63□□□□□ -0.55
VAPB-202ENST00000395802 GATA4P43694 442 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 DEFA1P59665 94 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 DEFA3P59666 94 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 MRPS10P82664 201 aaKnown RBP11.63□□□□□ -0.55
VAPB-202ENST00000395802 TNFAIP6P98066 277 aaPredicted RBP11.63□□□□□ -0.55
VAPB-202ENST00000395802 SCN1BQ07699 218 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 PLA2G7Q13093 441 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 MAB21L1Q13394 359 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 UNC119Q13432 240 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 TESK1Q15569 626 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 AGAP6Q5VW22 663 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 C1QL2Q7Z5L3 287 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 LINC00596Q86U02 117 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 OSR2Q8N2R0 312 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 OR51T1Q8NGJ9 327 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 SETD6Q8TBK2 473 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 AQP3Q92482 292 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 C1orf147Q96MC9 270 aaPredicted RBP11.63□□□□□ -0.55
VAPB-202ENST00000395802 HS3ST6Q96QI5 342 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 KCNK15Q9H427 330 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 FN3KRPQ9HA64 309 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 DECR2Q9NUI1 292 aa11.63□□□□□ -0.55
VAPB-202ENST00000395802 FLNCQ14315 2725 aa11.62□□□□□ -0.55
VAPB-202ENST00000395802 CDIPTO14735 213 aa11.62□□□□□ -0.55
VAPB-202ENST00000395802 CD55P08174 381 aa11.62□□□□□ -0.55
VAPB-202ENST00000395802 MNDAP41218 407 aa11.62□□□□□ -0.55
VAPB-202ENST00000395802 RPS27AP62979 156 aaKnown RBP11.62□□□□□ -0.55
VAPB-202ENST00000395802 RNF144BQ7Z419 303 aa11.62□□□□□ -0.55
VAPB-202ENST00000395802 Q8NFD4 153 aa11.62□□□□□ -0.55
VAPB-202ENST00000395802 OR2V2Q96R30 315 aa11.62□□□□□ -0.55
VAPB-202ENST00000395802 TM2D1Q9BX74 207 aa11.62□□□□□ -0.55
VAPB-202ENST00000395802 SELENOIQ9C0D9 397 aa11.62□□□□□ -0.55
VAPB-202ENST00000395802 FGF23Q9GZV9 251 aaPredicted RBP11.62□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A10PA6NDY2 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A18PA6NE21 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A16PA6NEW6 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A20PA6NIJ5 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A8PA6NJQ4 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A7PA6NKC0 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A22PA8MWA6 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A12PA8MX19 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A5PA8MXJ8 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A23PA8MXZ1 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 HS3ST1O14792 307 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 NOS1APO75052 506 aaPredicted RBP11.61□□□□□ -0.55
VAPB-202ENST00000395802 PLAUP00749 431 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 IGHV1-46P01743 117 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A15PP0C7V4 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A13PP0C7W8 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A14PP0C7W9 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FAM90A24PP0C7X0 464 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 CDK2P24941 298 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 EFNB2P52799 333 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 FGF12P61328 243 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 NHLRC3Q5JS37 347 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 OR10K2Q6IF99 312 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 TMEM104Q8NE00 496 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 OR10Z1Q8NGY1 313 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 LILRB1Q8NHL6 650 aaPredicted RBP11.61□□□□□ -0.55
VAPB-202ENST00000395802 HPS1Q92902 700 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 TRIM63Q969Q1 353 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 SLAMF9Q96A28 289 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 MEGF10Q96KG7 1140 aa11.61□□□□□ -0.55
VAPB-202ENST00000395802 MRPS7Q9Y2R9 242 aaKnown RBP11.61□□□□□ -0.55
VAPB-202ENST00000395802 LRRC30A6NM36 301 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 CTDSPLO15194 276 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 CFHR2P36980 270 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 ASAH1Q13510 395 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 SWI5Q1ZZU3 235 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 TRIQKQ629K1 86 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 BIVMQ86UB2 503 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 IZUMO1Q8IYV9 350 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 FAM89BQ8N5H3 189 aa11.6□□□□□ -0.55
VAPB-202ENST00000395802 OR11L1Q8NGX0 322 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms