RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 DPCDQ9BVM2 203 aaPredicted RBP9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 ASCL3Q9NQ33 180 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 GLRX2Q9NS18 164 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 PLEKHJ1Q9NW61 149 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 SHPKQ9UHJ6 478 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 GPR132Q9UNW8 380 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 ANKRD34BA5PLL1 514 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 OR2AT4A6NND4 320 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 PRSS44E7EML9 344 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 EFSO43281 561 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 TPD52L2O43399 206 aaKnown RBP9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 IGHV3-9P01782 118 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 RPA2P15927 270 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 CXCL2P19875 107 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 DTYMKP23919 212 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 SSTR2P30874 369 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 S100A11P31949 105 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 TNFSF10P50591 281 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 SNU13P55769 128 aaKnown RBP9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 PPP1R1AQ13522 171 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 TGIF1Q15583 401 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 TMEM128Q5BJH2 165 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 LY6G6FQ5SQ64 297 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 DCAF12L2Q5VW00 463 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 PLCXD3Q63HM9 321 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 IGFL2Q6UWQ7 119 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 MOB3CQ70IA8 216 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 LHFPL1Q86WI0 220 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 EMG1Q92979 244 aaKnown RBP9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 PPA2Q9H2U2 334 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 COMMD9Q9P000 198 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 LIPGQ9Y5X9 500 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 LRRK2Q5S007 2527 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 COL12A1Q99715 3063 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 IGKV1-27A0A075B6S5 117 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 LINC00862A6NCI5 91 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A10PA6NDY2 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A18PA6NE21 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A16PA6NEW6 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A20PA6NIJ5 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A8PA6NJQ4 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 SLC22A20A6NK97 555 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A7PA6NKC0 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FIGNL2A6NMB9 653 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A22PA8MWA6 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A12PA8MX19 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A5PA8MXJ8 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A23PA8MXZ1 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 J3QW42 95 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 NOS1APO75052 506 aaPredicted RBP9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 SS18L1O75177 396 aaPredicted RBP9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 RP2O75695 350 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 MPC2O95563 127 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 CST4P01036 141 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 IGHG3P01860 377 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A15PP0C7V4 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A13PP0C7W8 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A14PP0C7W9 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM90A24PP0C7X0 464 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 SLC25A4P12235 298 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 PPP3CBP16298 524 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 GABRR1P24046 479 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 MPGP29372 298 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 PDZK1IP1Q13113 114 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 EXOSC2Q13868 293 aaKnown RBP9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 CHRFAM7AQ494W8 412 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 CLLU1Q5K131 121 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 ATP1A1-AS1Q5TC04 95 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 TMEM65Q6PI78 240 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 SAXO1Q8IYX7 474 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 OSR2Q8N2R0 312 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 MARCH1Q8TCQ1 289 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 PIGCQ92535 297 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 WBP1Q96G27 269 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 GMPPAQ96IJ6 420 aaPredicted RBP9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 ST6GALNAC5Q9BVH7 336 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 REPIN1Q9BWE0 567 aaKnown RBP9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 DEFB127Q9H1M4 99 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 TMEM165Q9HC07 324 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 OSGIN2Q9Y236 505 aa9.06□□□□□ -0.96
POLR2J3-201ENST00000379340 MYO9AB2RTY4 2548 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 TLN1Q9Y490 2541 aaKnown RBP9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 ARHGAP21Q5T5U3 1957 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 TNRC6AQ8NDV7 1962 aaKnown RBP9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 LOC100509620A0A075B734 347 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 FXYD6-FXYD2A0A087WZ82 144 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 A0A096LPE4 126 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 A0A0D9SG52 128 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 A0A1W2PPZ6 126 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 SPRY1O43609 319 aaPredicted RBP9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 HLA-HP01893 362 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 CD79AP11912 226 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 CHATP28329 748 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 RAB14P61106 215 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 RAB1AP62820 205 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 CYCSP99999 105 aaKnown RBP9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 SORDQ00796 357 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 FBXW9Q5XUX1 488 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 C3P1Q6ZMU1 363 aa9.05□□□□□ -0.96
POLR2J3-201ENST00000379340 C17orf107Q6ZR85 190 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms