RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 EHFQ9NZC4 300 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 TMEM14AQ9Y6G1 99 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 A0A0A6YYD4 124 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 ZNF823P16415 610 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 CHATP28329 748 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 PMELP40967 661 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 SLC25A1P53007 311 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 RNF4P78317 190 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 DLK1P80370 383 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 HMGN3Q15651 99 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 FAM180AQ6UWF9 173 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 MAMDC2Q7Z304 686 aaPredicted RBP11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 ZNF664Q8N3J9 261 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 ADAT3Q96EY9 351 aaPredicted RBP11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 CDC6Q99741 560 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 POLR1DQ9Y2S0 133 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 LIPGQ9Y5X9 500 aa11.28□□□□□ -0.6
PPFIA4-210ENST00000599966 ARHGAP21Q5T5U3 1957 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 TMEM127O75204 238 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 HCKP08631 526 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 ZNF25P17030 456 aaPredicted RBP11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 PCP4P48539 62 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 PRSS12P56730 875 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 SLC26A5P58743 744 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 CSNK2A1P68400 391 aaPredicted RBP11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 RHEBQ15382 184 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 PCK2Q16822 640 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 CPEB2Q7Z5Q1 589 aaKnown RBP11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 CSNK2A3Q8NEV1 391 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 OR5H2Q8NGV7 314 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 C8orf44Q96CB5 159 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 GALNT14Q96FL9 552 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 ARHGAP5-AS1Q96IT6 56 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 PRRX2Q99811 253 aa11.27□□□□□ -0.6
PPFIA4-210ENST00000599966 CHD3Q12873 2000 aaKnown RBP11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 JTBO76095 146 aa11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 AHSA1O95433 338 aa11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 DDAH2O95865 285 aa11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 CDAP32320 146 aa11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 SLC35A1P78382 337 aa11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 C1orf140Q5VVS0 124 aa11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 MALSU1Q96EH3 234 aa11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 LUZP4Q9P127 313 aa11.27□□□□□ -0.61
PPFIA4-210ENST00000599966 A6NNC1 897 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 NOVA1P51513 510 aaKnown RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 AFF3P51826 1226 aaKnown RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 RPL27P61353 136 aaKnown RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 C5orf24Q7Z6I8 188 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 ZNF721Q8TF20 911 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 HPSE2Q8WWQ2 592 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 MRPL37Q9BZE1 423 aaKnown RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 ZNF701Q9NV72 531 aaPredicted RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 COPS7AQ9UBW8 275 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 OR52A1Q9UKL2 312 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 NXPH3O95157 252 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 CNOT4O95628 575 aaKnown RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 BGLAPP02818 100 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 MMP9P14780 707 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 IGFBP3P17936 291 aaPredicted RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 CD38P28907 300 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 PTGER4P35408 488 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 TAS2R31P59538 309 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 ZNF880Q6PDB4 577 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 CATSPERDQ86XM0 798 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 FSCN3Q9NQT6 498 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 SUSD2Q9UGT4 822 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 TRAV36DV7A0A075B6V5 113 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 FAM221AA4D161 298 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 FBLP22087 321 aaKnown RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 RBMXP38159 391 aaKnown RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 FNDC7Q5VTL7 733 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 FAHD2BQ6P2I3 314 aaPredicted RBP11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 GLIPR1L1Q6UWM5 242 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 ZNF440Q8IYI8 595 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 CYB561D1Q8N8Q1 229 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 TOMM40LQ969M1 308 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 FAHD2AQ96GK7 314 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 SLC46A1Q96NT5 459 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 FBRSQ9HAH7 460 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 OR14J1Q9UGF5 321 aa11.26□□□□□ -0.61
PPFIA4-210ENST00000599966 SHANK1Q9Y566 2161 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 FRYQ5TBA9 3013 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 A0A1W2PNR3 127 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 DANCRP0C864 163 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 PET100P0DJ07 73 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 SFTPDP35247 375 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 OR3A4PP47883 348 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 ZNF248Q8NDW4 579 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 SLC26A10Q8NG04 563 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 FNDC9Q8TBE3 224 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 ADIPOR1Q96A54 375 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 CDCA3Q99618 268 aaPredicted RBP11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 HIST1H2BLQ99880 126 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 VN1R1Q9GZP7 353 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 CBLN4Q9NTU7 201 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 THADAQ6YHU6 1953 aa11.25□□□□□ -0.61
PPFIA4-210ENST00000599966 PRRC2CQ9Y520 2896 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms