RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CEACAM21Q3KPI0 293 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 CLVS2Q5SYC1 327 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 TMEM244Q5VVB8 128 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 FDX2Q6P4F2 183 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 MOB3CQ70IA8 216 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 LHFPL3Q86UP9 236 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 C8orf59Q8N0T1 100 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 BOLLQ8N9W6 283 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 PNLDC1Q8NA58 520 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 OR52I1Q8NGK6 324 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 SSMEM1Q8WWF3 244 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 WDFY2Q96P53 400 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 ALG8Q9BVK2 526 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 VCX3BQ9H321 246 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 PLEKHA1Q9HB21 404 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 TNFRSF19Q9NS68 423 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 NKX1-2Q9UD57 310 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 MYRFQ9Y2G1 1151 aa14.5□□□□□ -0.09
SHKBP1-203ENST00000594298 OR5B21A6NL26 309 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 H0YJX3 145 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 CLIC3O95833 236 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 FAHP16930 419 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 DCKP27707 260 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 CCR9P51686 369 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 GNG3P63215 75 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 HOXA4Q00056 320 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 ODF4Q2M2E3 257 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 FAM76BQ5HYJ3 339 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 PLCXD3Q63HM9 321 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 SFRP4Q6FHJ7 346 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 BRICD5Q6PL45 260 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 Q6ZSR3 168 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 ZNF826PQ6ZT77 177 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 OR10Z1Q8NGY1 313 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 OR14K1Q8NGZ2 314 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 OR2G2Q8NGZ5 317 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 DYRK2Q92630 601 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 C4orf36Q96KX1 117 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 TLNRD1Q9H1K6 362 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 MMP27Q9H306 513 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 FGF20Q9NP95 211 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 ERVK13-1Q9NX77 482 aa14.49□□□□□ -0.09
SHKBP1-203ENST00000594298 IGHV1-69DA0A0B4J2H0 117 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 OOEPA6NGQ2 149 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 CDIPTO14735 213 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 TIMM23O14925 209 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 ADAM20O43506 726 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 SERPINA3P01011 423 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 LHBP01229 141 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 IGHV1-69P01742 117 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 GBX2P52951 348 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 WDR38Q5JTN6 314 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 METTL11BQ5VVY1 283 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 WDR86Q86TI4 376 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 C11orf53Q8IXP5 236 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 PRSS35Q8N3Z0 413 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 CNIH3Q8TBE1 160 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 TBC1D15Q8TC07 691 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 LRRC29Q8WV35 223 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 C10orf35Q96D05 121 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 JAM3Q9BX67 310 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 SIRPDQ9H106 197 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 PPP1R3EQ9H7J1 279 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 SMURF1Q9HCE7 757 aa14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 CHCHD3Q9NX63 227 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-203ENST00000594298 A0A0G2JK05 382 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 ZNF732B4DXR9 585 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 C3orf80F5H4A9 247 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 M0QZ24 198 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 ECDO95905 644 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 MUC1P15941 1255 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 GPM6AP51674 278 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 SMN1Q16637 294 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 MICBQ29980 383 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 CEP78Q5JTW2 689 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 WDR82Q6UXN9 313 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 TMPRSS11AQ6ZMR5 421 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 LDLRAD3Q86YD5 345 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 GCSAMQ8N6F7 178 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 ZNF671Q8TAW3 534 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 HPSE2Q8WWQ2 592 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 TFAP2CQ92754 450 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 PELI1Q96FA3 418 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 KAAG1Q9UBP8 84 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 SLC7A11Q9UPY5 501 aa14.47□□□□□ -0.09
SHKBP1-203ENST00000594298 LOC107986453A0A1B0GWG9 222 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 GATBO75879 557 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 CLPXO76031 633 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 ISG15P05161 165 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 MYL12AP19105 171 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 KIR3DL2P43630 455 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 CSNK2BP67870 215 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 ALKBH1Q13686 389 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 TEX36Q5VZQ5 186 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 TMEM42Q69YG0 159 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 ZNF573Q86YE8 665 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 SCCPDHQ8NBX0 429 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 RPL3LQ92901 407 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 TMEM80Q96HE8 168 aa14.46□□□□□ -0.09
SHKBP1-203ENST00000594298 FRRS1LQ9P0K9 344 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms