RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 RALGAPA1Q6GYQ0 2036 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 ZNF814B7Z6K7 855 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 OR5H8P0DN80 308 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 FAHP16930 419 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 CD27P26842 260 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 GUCA1AP43080 201 aaPredicted RBP15.36■□□□□ 0.05
SYNE3-202ENST00000553340 SUCLG1P53597 346 aaKnown RBP15.36■□□□□ 0.05
SYNE3-202ENST00000553340 PIGPP57054 158 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 HNRNPKP61978 463 aaKnown RBP eCLIP15.36■□□□□ 0.05
SYNE3-202ENST00000553340 RPUSD3Q6P087 351 aaKnown RBP15.36■□□□□ 0.05
SYNE3-202ENST00000553340 RNF138Q8WVD3 245 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 GINS3Q9BRX5 216 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 CHST5Q9GZS9 411 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 RANBP2P49792 3224 aaKnown RBP15.36■□□□□ 0.05
SYNE3-202ENST00000553340 UMAD1C9J7I0 102 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 F5H5K5 113 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 TLX3O43711 291 aaPredicted RBP15.36■□□□□ 0.05
SYNE3-202ENST00000553340 DUX1O43812 170 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 PRH1P02810 166 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 DAOP14920 347 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 P2RY1P47900 373 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 ANKRD37Q7Z713 158 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 PIGTQ969N2 578 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 HDHD3Q9BSH5 251 aaPredicted RBP15.36■□□□□ 0.05
SYNE3-202ENST00000553340 C19orf12Q9NSK7 152 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 V9GYS6 101 aa15.36■□□□□ 0.05
SYNE3-202ENST00000553340 TRBV11-1A0A0K0K1C0 115 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 A0A0U1RQV5 110 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 GPR137BO60478 399 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 TMEM225BP0DP42 221 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 RAB5CP51148 216 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 RHEBQ15382 184 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 GPR157Q5UAW9 335 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 OR1J1Q8NGS3 322 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 ZNF501Q96CX3 271 aaPredicted RBP15.35■□□□□ 0.05
SYNE3-202ENST00000553340 BSCL2Q96G97 398 aaPredicted RBP15.35■□□□□ 0.05
SYNE3-202ENST00000553340 TGIF2Q9GZN2 237 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 METTL7AQ9H8H3 244 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 STRAPQ9Y3F4 350 aaKnown RBP15.35■□□□□ 0.05
SYNE3-202ENST00000553340 hCG_1809904A0A1W2PP81 198 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 A0A1W2PR64 198 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 A0A1W2PRV1 198 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 SHISA7A6NL88 538 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 LSM6P62312 80 aaKnown RBP15.35■□□□□ 0.05
SYNE3-202ENST00000553340 SLC35A1P78382 337 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 PBDC1Q9BVG4 233 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 KCNJ16Q9NPI9 418 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 PIGLQ9Y2B2 252 aa15.35■□□□□ 0.05
SYNE3-202ENST00000553340 IGHV1OR15-9A0A0B4J2B8 117 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 RAMP1O60894 148 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 IGHV2-5P01817 119 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 HEXBP07686 556 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 FHITP49789 147 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 SULT1A1P50225 295 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 SP6Q3SY56 376 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 ABCA11PQ4W5N1 156 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 FAM24BQ8N5W8 94 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 GJC3Q8NFK1 279 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 TCTEX1D2Q8WW35 142 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 TOMM40LQ969M1 308 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 Q96M66 194 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 OR51M1Q9H341 326 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 NAA60Q9H7X0 242 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 LMAN1LQ9HAT1 526 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 WFDC1Q9HC57 220 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 IGLV3-32A0A0A0MS00 114 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 MASP2O00187 686 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 EIF1BO60739 113 aaKnown RBP15.34■□□□□ 0.05
SYNE3-202ENST00000553340 SFTPDP35247 375 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 EIF1P41567 113 aaKnown RBP15.34■□□□□ 0.05
SYNE3-202ENST00000553340 POLR2GP62487 172 aaKnown RBP eCLIP15.34■□□□□ 0.05
SYNE3-202ENST00000553340 SHHQ15465 462 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 ADAM5Q6NVV9 412 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 TMEM156Q8N614 296 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 CD300LFQ8TDQ1 290 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 SLC35B3Q9H1N7 401 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 NECAP2Q9NVZ3 263 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 UNC13CQ8NB66 2214 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 MYO7BQ6PIF6 2116 aa15.34■□□□□ 0.05
SYNE3-202ENST00000553340 SZT2Q5T011 3432 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 TRAV20A0A0B4J274 112 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 ZNF850A8MQ14 1090 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 METTL12A8MUP2 240 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 DIRAS3O95661 229 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 OR5AC1P0C628 307 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 ZNF728P0DKX0 622 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 NR2C1P13056 603 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 MSR1P21757 451 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 S100PP25815 95 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 TMEM187Q14656 261 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 OR5L2Q8NGL0 311 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 RTN4IP1Q8WWV3 396 aaPredicted RBP15.33■□□□□ 0.05
SYNE3-202ENST00000553340 MALSU1Q96EH3 234 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 GALNT14Q96FL9 552 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 PIGQQ9BRB3 760 aa15.33■□□□□ 0.05
SYNE3-202ENST00000553340 AQP7P3A6NL99 342 aa15.33■□□□□ 0.04
SYNE3-202ENST00000553340 PTGDSP41222 190 aa15.33■□□□□ 0.04
SYNE3-202ENST00000553340 CLDN17P56750 224 aa15.33■□□□□ 0.04
SYNE3-202ENST00000553340 FAM209BQ5JX69 171 aa15.33■□□□□ 0.04
SYNE3-202ENST00000553340 FAM69BQ5VUD6 431 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms