RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 OR10D3Q8NH80 312 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 FNDC9Q8TBE3 224 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 CDX2Q99626 313 aaPredicted RBP11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 C12orf49Q9H741 205 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 LOC390937A0A1W2PQ73 354 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 C10orf142B7Z368 130 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 COX6A1P12074 109 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 SUCLG1P53597 346 aaKnown RBP11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 SGPP2Q8IWX5 399 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 MARC2Q969Z3 335 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 MRPL24Q96A35 216 aaKnown RBP11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 DCHS1Q96JQ0 3298 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 TRAV39A0A0B4J263 110 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 A0A1W2PNV4 684 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 TMEM127O75204 238 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 CELA3AP09093 270 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 IL32P24001 234 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 FCGR2CP31995 323 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 MECP2P51608 486 aaKnown RBP11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 DHODHQ02127 395 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 HGFACQ04756 655 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 SWI5Q1ZZU3 235 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 SPATA46Q5T0L3 261 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 H3F3CQ6NXT2 135 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 DTWD2Q8NBA8 298 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 ESRP2Q9H6T0 727 aaKnown RBP11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 PADI1Q9ULC6 663 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 ST3GAL6Q9Y274 331 aa11.94□□□□□ -0.5
PRPF40B-209ENST00000548825 KLF7O75840 302 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 C1QL1O75973 258 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 IFNA21P01568 189 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 DSCR4P56555 118 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 CLINT1Q14677 625 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 SECTM1Q8WVN6 248 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 THOC3Q96J01 351 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 MAGT1Q9H0U3 335 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 MLXQ9UH92 298 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 ABCD4O14678 606 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 NME2P1O60361 137 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 SFT2D2O95562 160 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 ACTL6AO96019 429 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 NRASP01111 189 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 FGF2P09038 288 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 GSTP1P09211 210 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 CD80P33681 288 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 MRPL14Q6P1L8 145 aaKnown RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 OIT3Q8WWZ8 545 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 C1orf147Q96MC9 270 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 NKX6-2Q9C056 277 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 METTL9Q9H1A3 318 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 AK3Q9UIJ7 227 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 K7EPK0 472 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 NFYBP25208 207 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 PPT1P50897 306 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 FOXG1P55316 489 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 TAS2R31P59538 309 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 MYPOPQ86VE0 399 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 FAM71E2Q8N5Q1 922 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 IL1F10Q8WWZ1 152 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 RTBDNQ9BSG5 229 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 RNF126Q9BV68 326 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 SLC25A32Q9H2D1 315 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 MOB1AQ9H8S9 216 aa11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
PRPF40B-209ENST00000548825 MFNGO00587 321 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 PHF1O43189 567 aaPredicted RBP11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 PTGER4P35408 488 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 CAV2P51636 162 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 SUPT4H1P63272 117 aaKnown RBP11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 PLGLB1Q02325 96 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 ZNF385CQ66K41 422 aaPredicted RBP11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 PMS2CLQ68D20 193 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 LPCAT3Q6P1A2 487 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 FOXB1Q99853 325 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 SULT4A1Q9BR01 284 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 EDEM2Q9BV94 578 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 LRFN1Q9P244 771 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 PILRBQ9UKJ0 227 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 A8MXK9 166 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 EIF1BO60739 113 aaKnown RBP11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 OR5AC1P0C628 307 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 NPBWR2P48146 333 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 ZNF92Q03936 586 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 RIPPLY1Q0D2K3 151 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 RSPO1Q2MKA7 263 aaPredicted RBP11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 CCDC36Q8IYA8 594 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 CARFQ8N187 725 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 PIK3IP1Q96FE7 263 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 PCED1AQ9H1Q7 454 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 TAF9BQ9HBM6 251 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 CEP192Q8TEP8 1941 aa11.92□□□□□ -0.5
PRPF40B-209ENST00000548825 ACACAQ13085 2346 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 C5orf49A4QMS7 147 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 CBR3O75828 277 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 IFNA2P01563 188 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 GP1BAP07359 652 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 EPHA1P21709 976 aa11.91□□□□□ -0.5
PRPF40B-209ENST00000548825 FHITP49789 147 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms