RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 TCF21O43680 179 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR1F1O43749 312 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 CTNSO60931 367 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 ENTPD5O75356 428 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 SCGB2A1O75556 95 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 MT-ATP6P00846 226 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 SERPIND1P05546 499 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 GUSBP08236 651 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 HIST1H2AGP0C0S8 130 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 FAM58BPP0C7Q3 252 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 MPC1LP0DKB6 136 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR8G3PP0DMU2 310 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 SMIM10L1P0DMW3 83 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 CCL3P10147 92 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 CPN1P15169 458 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 NQO2P16083 231 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 IL12AP29459 219 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 CCR8P51685 355 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 CLDN8P56748 225 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 UBE2G2P60604 165 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 ABCE1P61221 599 aaKnown RBP3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 STXBP1P61764 594 aaKnown RBP3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 TGM3Q08188 693 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 BNIP2Q12982 314 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 BTN1A1Q13410 526 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 SERTAD2Q14140 314 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 RFX4Q33E94 735 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 COQ5Q5HYK3 327 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 SPATA46Q5T0L3 261 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 CLEC6AQ6EIG7 209 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR2A2Q6IF42 318 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 NANOGP8Q6NSW7 305 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 TRAT1Q6PIZ9 186 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 LRRN1Q6UXK5 716 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 LRRC70Q7Z2Q7 622 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 KATNAL2Q8IYT4 538 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 MMGT1Q8N4V1 131 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 CD177Q8N6Q3 437 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 NUBPLQ8TB37 319 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 ACTL9Q8TC94 416 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 NT5CQ8TCD5 201 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 AP3S1Q92572 193 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 FAM162AQ96A26 154 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 RASD2Q96D21 266 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 SMIM10Q96HG1 83 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 CNBD2Q96M20 576 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 TNFRSF13CQ96RJ3 184 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 CITED1Q99966 193 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 AIF1LQ9BQI0 150 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 C7orf50Q9BRJ6 194 aaKnown RBP3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF2Q9BSG1 426 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 NAT9Q9BTE0 207 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 TOLLIPQ9H0E2 274 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 SLITRK2Q9H156 845 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 RGCCQ9H4X1 137 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 METTL7AQ9H8H3 244 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 EFCAB1Q9HAE3 211 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 SH2D2AQ9NP31 389 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 ABCB9Q9NP78 766 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 MCUBQ9NWR8 336 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 TREM2Q9NZC2 230 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 BFARQ9NZS9 450 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 NAGKQ9UJ70 344 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF223Q9UK11 482 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 UGT2A1Q9Y4X1 527 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 WIF1Q9Y5W5 379 aa3.59□□□□□ -1.83
HMGB3P5-201ENST00000428894 ALPK2Q86TB3 2170 aa3.59□□□□□ -1.84
HMGB3P5-201ENST00000428894 NOTCH1P46531 2555 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 MALRD1Q5VYJ5 2156 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 A0A1B0GV72 72 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 FRG2CA6NGY1 282 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 CLDN25C9JDP6 229 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TSTD3H0UI37 97 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TNFSF12O43508 249 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR10H3O60404 316 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 FADS1O60427 444 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TSPAN2O60636 221 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 SCN2BO60939 215 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 BANF1O75531 89 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLC22A5O76082 557 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 SUPT7LO94864 414 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 H6PDO95479 791 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 PTTG1O95997 202 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 RENP00797 406 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TGFAP01135 160 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 THY1P04216 161 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 SERPINA6P08185 405 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 CTXN2P0C2S0 81 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 IL7P13232 177 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 TBXA2RP21731 343 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 MSR1P21757 451 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 PSMB6P28072 239 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 GTF2E2P29084 291 aaKnown RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 IMPA1P29218 277 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 PRDX6P30041 224 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 COILP38432 576 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 SERPINB10P48595 397 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 UGT2B15P54855 530 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 MTCP1P56278 107 aa3.58□□□□□ -1.84
HMGB3P5-201ENST00000428894 CLDN17P56750 224 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms