RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TLN2Q9Y4G6 2542 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 IGHV3OR15-7A0A075B7D8 119 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 TRBV5-7A0A0A0MS05 114 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 A0A1W2PPK0 400 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 CEACAM18A8MTB9 384 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 LY6G6DO95868 133 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 HCKP08631 526 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 PCMT1P22061 227 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 MPZP25189 248 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 IL24Q13007 206 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 ASPHD2Q6ICH7 369 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 ZNF529Q6P280 563 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 CLEC9AQ6UXN8 241 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 THRSPQ92748 146 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 ORAI1Q96D31 301 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 C1orf159Q96HA4 380 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 WDR13Q9H1Z4 485 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 GSX1Q9H4S2 264 aaPredicted RBP16.07■□□□□ 0.16
HOXA9-202ENST00000396345 PATZ1Q9HBE1 687 aaKnown RBP16.07■□□□□ 0.16
HOXA9-202ENST00000396345 CKLFQ9UBR5 152 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 MIOXQ9UGB7 285 aa16.07■□□□□ 0.16
HOXA9-202ENST00000396345 ABCA2Q9BZC7 2435 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.06■□□□□ 0.16
HOXA9-202ENST00000396345 MAGEB3O15480 346 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 TNFAIP8O95379 198 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 PLATP00750 562 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 PGA5P0DJD9 388 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 MUC1P15941 1255 aaPredicted RBP16.06■□□□□ 0.16
HOXA9-202ENST00000396345 GLRA1P23415 457 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 MAPK3P27361 379 aaPredicted RBP16.06■□□□□ 0.16
HOXA9-202ENST00000396345 PPP3R1P63098 170 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 KRTAP1-1Q07627 177 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 MICBQ29980 383 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 ACSM3Q53FZ2 586 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 ARMCX4Q5H9R4 360 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 UBE2UQ5VVX9 321 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 DCDC5Q6ZRR9 648 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 FAM90A1Q86YD7 464 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 POC1AQ8NBT0 407 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 OR51A2Q8NGJ7 313 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 FCGR1BQ92637 280 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 MSI2Q96DH6 328 aaKnown RBP16.06■□□□□ 0.16
HOXA9-202ENST00000396345 SEH1LQ96EE3 360 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 ZNF488Q96MN9 340 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 DERL3Q96Q80 235 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 SPACA5Q96QH8 159 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 DNAJB11Q9UBS4 358 aa16.06■□□□□ 0.16
HOXA9-202ENST00000396345 FAM157AC9JC47 383 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 F5H0A9 414 aaPredicted RBP16.05■□□□□ 0.16
HOXA9-202ENST00000396345 NDUFA2O43678 99 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 CD5LO43866 347 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 NOS1APO75052 506 aaPredicted RBP16.05■□□□□ 0.16
HOXA9-202ENST00000396345 GPX5O75715 221 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 GYPAP02724 150 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 RPS2P15880 293 aaKnown RBP16.05■□□□□ 0.16
HOXA9-202ENST00000396345 IGFBP3P17936 291 aaPredicted RBP16.05■□□□□ 0.16
HOXA9-202ENST00000396345 TGFBR2P37173 567 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 POU3F4P49335 361 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 RPS25P62851 125 aaKnown RBP16.05■□□□□ 0.16
HOXA9-202ENST00000396345 TRAM1Q15629 374 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 UNQ9370/PRO34162Q6UXP9 181 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 SLC25A26Q70HW3 274 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 PHC2Q8IXK0 858 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 LINC01356Q8N9X3 169 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 TMEM203Q969S6 136 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 RFT1Q96AA3 541 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 TMIGD2Q96BF3 282 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 NOX4Q9NPH5 578 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 RASL12Q9NYN1 266 aa16.05■□□□□ 0.16
HOXA9-202ENST00000396345 TNFRSF13BO14836 293 aaPredicted RBP16.04■□□□□ 0.16
HOXA9-202ENST00000396345 CYB5AP00167 134 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 ACAA1P09110 424 aaPredicted RBP16.04■□□□□ 0.16
HOXA9-202ENST00000396345 WNT2P09544 360 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 ZNF16P17020 682 aaPredicted RBP16.04■□□□□ 0.16
HOXA9-202ENST00000396345 FSTP19883 344 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 CPT2P23786 658 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 PSMA1P25786 263 aaKnown RBP16.04■□□□□ 0.16
HOXA9-202ENST00000396345 PSMB9P28065 219 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 BDKRB2P30411 391 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 PDZK1IP1Q13113 114 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 INSL4Q14641 139 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 KISS1Q15726 138 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 LYPD2Q6UXB3 125 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 RNF144BQ7Z419 303 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 CEACAM19Q7Z692 300 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 SATL1Q86VE3 508 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 MKXQ8IYA7 352 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 SLAMF9Q96A28 289 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 C12orf43Q96C57 262 aaKnown RBP16.04■□□□□ 0.16
HOXA9-202ENST00000396345 NEIL1Q96FI4 390 aaPredicted RBP16.04■□□□□ 0.16
HOXA9-202ENST00000396345 CPNE2Q96FN4 548 aaPredicted RBP16.04■□□□□ 0.16
HOXA9-202ENST00000396345 NRIP2Q9BQI9 281 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 TMEM138Q9NPI0 162 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 SNTG1Q9NSN8 517 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 MTCH1Q9NZJ7 389 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 NLKQ9UBE8 527 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 FOXJ3Q9UPW0 622 aa16.04■□□□□ 0.16
HOXA9-202ENST00000396345 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.03■□□□□ 0.16
HOXA9-202ENST00000396345 TRAV8-7A0A075B6U6 113 aa16.03■□□□□ 0.16
HOXA9-202ENST00000396345 B4DSR2 109 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms