RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CABLES2Q9BTV7 478 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 PLXNB2O15031 1838 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 MGST1P10620 155 aaKnown RBP15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 PABPC1L2AQ5JQF8 200 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 C6orf201Q7Z4U5 140 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR2M5A3KFT3 312 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 RAB27BO00194 218 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR3A4PP47883 348 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 KCNJ3P48549 501 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 MMP16P51512 607 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR8U1Q8NH10 309 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR4F5Q8NH21 305 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR10D3Q8NH80 312 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR4F4Q96R69 305 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 FAAP24Q9BTP7 215 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 EDEM2Q9BV94 578 aa15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 LSM2Q9Y333 95 aaKnown RBP15.19■□□□□ 0.02
TRAPPC11-201ENST00000334690 GREB1LQ9C091 1923 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 H3BP45 60 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 RRP8O43159 456 aaKnown RBP15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 GALR2O43603 387 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 RRASP10301 218 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR2B8PP59922 312 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 RAB32Q13637 225 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 PTPMT1Q8WUK0 201 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 RASL12Q9NYN1 266 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 ZNF230Q9UIE0 474 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 OSGIN2Q9Y236 505 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 TRAV17A0A0B4J275 112 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 TMEM30CPA0ZSE6 113 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 FOXS1O43638 330 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 MESP2Q0VG99 397 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 SCGB2A2Q13296 93 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 SSPNQ14714 243 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 SIGIRRQ6IA17 410 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 ZNF439Q8NDP4 499 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 TMEM52Q8NDY8 209 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 COMMD5Q9GZQ3 224 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 MMP26Q9NRE1 261 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 ALPK2Q86TB3 2170 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 IGKV1-8A0A0C4DH67 115 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 SHISA7A6NL88 538 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 CXCL3P19876 107 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 HABP2Q14520 560 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 TIGITQ495A1 244 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 RPUSD4Q96CM3 377 aaKnown RBP15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 SCMH1Q96GD3 660 aa15.18■□□□□ 0.02
TRAPPC11-201ENST00000334690 ABCD4O14678 606 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 CD1AP06126 327 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR8B12Q8NGG6 310 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR2Y1Q8NGV0 311 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 KISS1RQ969F8 398 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 ERGIC1Q969X5 290 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 OR5H15A6NDH6 313 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 K7EQM0 130 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 COL13A1Q5TAT6 717 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 CLDN23Q96B33 292 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 C10orf35Q96D05 121 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 PRSS27Q9BQR3 290 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 ADH4P08319 380 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 DEFA4P12838 97 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 NPBWR1P48145 328 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 H3F3AP84243 136 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 GVQW1Q8N7I0 195 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 TM4SF19Q96DZ7 209 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 SF3B5Q9BWJ5 86 aaKnown RBP15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 OPN4Q9UHM6 478 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 DSPPQ9NZW4 1301 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 MASP2O00187 686 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 KLF9Q13886 244 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 GUK1Q16774 197 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 HSD17B13Q7Z5P4 300 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 FAM58AQ8N1B3 248 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 ASB5Q8WWX0 329 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 NAA60Q9H7X0 242 aa15.17■□□□□ 0.02
TRAPPC11-201ENST00000334690 TRAV8-7A0A075B6U6 113 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 C7orf66A4D0T2 115 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 SPATA46Q5T0L3 261 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 SMIM15Q7Z3B0 74 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 RAB40CQ96S21 281 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 ZNF768Q9H5H4 540 aaKnown RBP15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 H3BMH7 237 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 HPXP02790 462 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 LIMS1P48059 325 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 SELENOPP49908 381 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 B3GNTL1Q67FW5 361 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 CXorf58Q96LI9 332 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 ZNF331Q9NQX6 463 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 CENPVL1A0A0U1RR11 272 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 BGLAPP02818 100 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 ERHP84090 104 aaKnown RBP15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 DMWDQ09019 674 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 RGS7BPQ6MZT1 257 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 RNF133Q8WVZ7 376 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 PPP1R14DQ9NXH3 145 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 ST6GALNAC2Q9UJ37 374 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 MKRN2OSH3BPM6 223 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 CNIH1O95406 144 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 LY86O95711 162 aa15.16■□□□□ 0.02
TRAPPC11-201ENST00000334690 GABRA1P14867 456 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms